Bugfix. ensembl was hardcoded

jlanga · May 27, 2019 · 607470f · 607470f
1 parent deae088
commit 607470f
Show file tree

Hide file tree

Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/bin/compare_to_gff3 b/bin/compare_to_gff3
@@ -47,7 +47,7 @@ if __name__ == '__main__':
         )
 
     # Process GFF3
-    BED3_TRUE = gff3_to_bed3(ARGS['input_gff3'], mode='ensembl')
+    BED3_TRUE = gff3_to_bed3(ARGS['input_gff3'], mode=ARGS['gff3_type'])
 
     # Filter out transcripts not present in the reference
     TRANSCRIPT_IDS = fasta_to_dict(ARGS['fasta']).keys()

diff --git a/exfi/__init__.py b/exfi/__init__.py
@@ -3,4 +3,4 @@
 filters.
 """
 
-__version__ = '1.5.5'
+__version__ = '1.5.6'