add large deletion

jodyphelan · Mar 12, 2019 · 276194b · 276194b
1 parent a61a487
commit 276194b
Showing 1 changed file with 0 additions and 1 deletion.
diff --git a/pathogenprofiler/profiler.py b/pathogenprofiler/profiler.py
@@ -44,7 +44,6 @@ def profiler(conf_file,prefix,r1=None,r2=None,bam_file=None,call_method="low",mi
 			delly_bcf = bam_obj.run_delly()
 			deletions = delly_bcf.overlap_bed(conf["bed"])
 			results = db_compare(db_file=conf["json_db"],mutations=results,bed_file=conf["bed"],deletions=deletions)
-			print("asdnjasndasdnbuibdisbaidbaui")
 		else:
 			results = db_compare(db_file=conf["json_db"],mutations=results,bed_file=conf["bed"])