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pathogen-profiler v3.0.0
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@jodyphelan jodyphelan released this 10 Aug 12:34
· 190 commits to master since this release
v3.0.0
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Learn about vigilant mode.

Changes

  • Stylistic changes (e.g. capitalisation of class names)
  • Use of logging for logging
  • Hard and soft filtering on variants
  • For parallel jobs (e.g. variant calling) now using joblib internally vs gnu parallel
  • Using pysam to extract data from VCFs
Assets 2
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