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  1. alpaca alpaca Public

    ALPACA is a caller for genomic variants (single nucleotide and small indels) from next-generation sequencing data that uses a novel algebraic approach to incorporate sample based filtering into the…

    Rust 23 1

  2. awesome-single-cell awesome-single-cell Public

    Forked from seandavi/awesome-single-cell

    List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.

    10 2

  3. bioinformatics-workflows bioinformatics-workflows Public

    Forked from GoekeLab/bioinformatics-workflows

    minimal example implementations for bioinformatics workflow managers

    Python 7 1

  4. libmodallogic libmodallogic Public

    Automatically exported from code.google.com/p/libmodallogic

    Java 4

  5. dna-seq-gatk-variant-calling dna-seq-gatk-variant-calling Public

    Forked from snakemake-workflows/dna-seq-gatk-variant-calling

    This Snakemake pipeline implements the GATK best-practices workflow

    HTML 4 1

  6. MultiQC MultiQC Public

    Forked from MultiQC/MultiQC

    Aggregate results from bioinformatics analyses across many samples into a single report.

    Python 2