chore: updated cran errors url

DESCRIPTION

@@ -1,7 +1,7 @@
 Package: BiasCorrector
 Title: A GUI to Correct Measurement Bias in DNA Methylation Analyses
-Version: 0.2.2
-Date: 2022-06-20
+Version: 0.2.2.9001
+Date: 2023-01-21
 Authors@R: c(
     person("Lorenz A.", "Kapsner", , "lorenz.kapsner@gmail.com", role = c("cre", "aut", "cph"),
            comment = c(ORCID = "0000-0003-1866-860X")),
@@ -29,4 +29,4 @@ Suggests:
     lintr,
     testthat
 Encoding: UTF-8
-RoxygenNote: 7.2.0
+RoxygenNote: 7.2.3

NEWS.md

@@ -1,106 +1,133 @@
 # BiasCorrector NEWS
 
-## Unreleased (2022-06-20)
+## Unreleased (2022-06-21)
 
-#### Others
+#### CI
 
-* added dependencies badge
-* updated lintr
-* updated news.md
-* updated news.md; updated reamde badges
-* removed context from unittests
+-   updated lint-stage
+    ([7291cff](https://github.com/kapsner/BiasCorrector/tree/7291cffe0a647fcbc42fbd5cde8bc6231263aea8))
+-   updated gha
+    ([e3796b9](https://github.com/kapsner/BiasCorrector/tree/e3796b954a97a8bd319eeb1836b89f4636fee99f))
 
-Full set of changes: [`v0.2.1...e2affe4`](https://github.com/kapsner/BiasCorrector/compare/v0.2.1...e2affe4)
+Full set of changes:
+[`v0.2.2...7291cff`](https://github.com/kapsner/BiasCorrector/compare/v0.2.2...7291cff)
 
-## v0.2.1 (2022-02-16)
+## v0.2.2 (2022-06-20)
 
+#### Tests
 
-Full set of changes: [`v0.2.0...v0.2.1`](https://github.com/kapsner/BiasCorrector/compare/v0.2.0...v0.2.1)
+-   fix linting errors
+    ([ee24961](https://github.com/kapsner/BiasCorrector/tree/ee24961bfd5b717a6f9b0bcb3b2044da98e4773a))
+-   removed context from unittests
+    ([5ee7bc6](https://github.com/kapsner/BiasCorrector/tree/5ee7bc6ba3e92f5a92448873dcea54015cc667c6))
 
-## v0.2.0 (2021-05-17)
+#### Other changes
 
+-   added dependencies badge
+    ([e2affe4](https://github.com/kapsner/BiasCorrector/tree/e2affe4e2da5838a391f666e0a2ab4613de6adf3))
+-   updated lintr
+    ([eb248c4](https://github.com/kapsner/BiasCorrector/tree/eb248c4cee4d11810fccd5c285320b9eea71b6b7))
+-   updated news.md
+    ([f14ba05](https://github.com/kapsner/BiasCorrector/tree/f14ba05bd125d77a4425c24d84adc29060ca76aa))
+-   updated news.md; updated reamde badges
+    ([17e9aa8](https://github.com/kapsner/BiasCorrector/tree/17e9aa81f6589032e4d031da1c40fabdec5e09fe))
 
-Full set of changes: [`v0.1.4...v0.2.0`](https://github.com/kapsner/BiasCorrector/compare/v0.1.4...v0.2.0)
+Full set of changes:
+[`v0.2.1...v0.2.2`](https://github.com/kapsner/BiasCorrector/compare/v0.2.1...v0.2.2)
 
-## v0.1.4 (2021-03-29)
+## v0.2.1 (2022-02-16)
 
+Full set of changes:
+[`v0.2.0...v0.2.1`](https://github.com/kapsner/BiasCorrector/compare/v0.2.0...v0.2.1)
 
-Full set of changes: [`v0.1.3...v0.1.4`](https://github.com/kapsner/BiasCorrector/compare/v0.1.3...v0.1.4)
+## v0.2.0 (2021-05-17)
 
-## v0.1.3 (2021-03-01)
+Full set of changes:
+[`v0.1.4...v0.2.0`](https://github.com/kapsner/BiasCorrector/compare/v0.1.4...v0.2.0)
 
+## v0.1.4 (2021-03-29)
 
-Full set of changes: [`v0.1.2...v0.1.3`](https://github.com/kapsner/BiasCorrector/compare/v0.1.2...v0.1.3)
+Full set of changes:
+[`v0.1.3...v0.1.4`](https://github.com/kapsner/BiasCorrector/compare/v0.1.3...v0.1.4)
 
-## v0.1.2 (2020-09-22)
+## v0.1.3 (2021-03-01)
+
+Full set of changes:
+[`v0.1.2...v0.1.3`](https://github.com/kapsner/BiasCorrector/compare/v0.1.2...v0.1.3)
 
+## v0.1.2 (2020-09-22)
 
-Full set of changes: [`v0.1.1...v0.1.2`](https://github.com/kapsner/BiasCorrector/compare/v0.1.1...v0.1.2)
+Full set of changes:
+[`v0.1.1...v0.1.2`](https://github.com/kapsner/BiasCorrector/compare/v0.1.1...v0.1.2)
 
 ## v0.1.1 (2020-08-16)
 
-
-Full set of changes: [`v0.1.0...v0.1.1`](https://github.com/kapsner/BiasCorrector/compare/v0.1.0...v0.1.1)
+Full set of changes:
+[`v0.1.0...v0.1.1`](https://github.com/kapsner/BiasCorrector/compare/v0.1.0...v0.1.1)
 
 ## v0.1.0 (2020-07-18)
 
-
-Full set of changes: [`v0.0.7...v0.1.0`](https://github.com/kapsner/BiasCorrector/compare/v0.0.7...v0.1.0)
+Full set of changes:
+[`v0.0.7...v0.1.0`](https://github.com/kapsner/BiasCorrector/compare/v0.0.7...v0.1.0)
 
 ## v0.0.7 (2020-06-18)
 
-
-Full set of changes: [`v0.0.6...v0.0.7`](https://github.com/kapsner/BiasCorrector/compare/v0.0.6...v0.0.7)
+Full set of changes:
+[`v0.0.6...v0.0.7`](https://github.com/kapsner/BiasCorrector/compare/v0.0.6...v0.0.7)
 
 ## v0.0.6 (2020-01-18)
 
-
-Full set of changes: [`v0.0.5...v0.0.6`](https://github.com/kapsner/BiasCorrector/compare/v0.0.5...v0.0.6)
+Full set of changes:
+[`v0.0.5...v0.0.6`](https://github.com/kapsner/BiasCorrector/compare/v0.0.5...v0.0.6)
 
 ## v0.0.5 (2019-12-16)
 
-
-Full set of changes: [`v0.0.4...v0.0.5`](https://github.com/kapsner/BiasCorrector/compare/v0.0.4...v0.0.5)
+Full set of changes:
+[`v0.0.4...v0.0.5`](https://github.com/kapsner/BiasCorrector/compare/v0.0.4...v0.0.5)
 
 ## v0.0.4 (2019-12-09)
 
-
-Full set of changes: [`v0.0.3...v0.0.4`](https://github.com/kapsner/BiasCorrector/compare/v0.0.3...v0.0.4)
+Full set of changes:
+[`v0.0.3...v0.0.4`](https://github.com/kapsner/BiasCorrector/compare/v0.0.3...v0.0.4)
 
 ## v0.0.3 (2019-11-16)
 
-
-Full set of changes: [`v0.0.2...v0.0.3`](https://github.com/kapsner/BiasCorrector/compare/v0.0.2...v0.0.3)
+Full set of changes:
+[`v0.0.2...v0.0.3`](https://github.com/kapsner/BiasCorrector/compare/v0.0.2...v0.0.3)
 
 ## v0.0.2 (2019-11-09)
 
+Full set of changes:
+[`v0.1.0.9001...v0.0.2`](https://github.com/kapsner/BiasCorrector/compare/v0.1.0.9001...v0.0.2)
 
-Full set of changes: [`v0.0.899...v0.0.2`](https://github.com/kapsner/BiasCorrector/compare/v0.0.899...v0.0.2)
+## v0.1.0.9001 (2019-07-28)
 
-## v0.0.899 (2019-06-20)
+Full set of changes:
+[`v0.0.899...v0.1.0.9001`](https://github.com/kapsner/BiasCorrector/compare/v0.0.899...v0.1.0.9001)
 
+## v0.0.899 (2019-06-20)
 
-Full set of changes: [`v0.9.4...v0.0.899`](https://github.com/kapsner/BiasCorrector/compare/v0.9.4...v0.0.899)
+Full set of changes:
+[`v0.9.4...v0.0.899`](https://github.com/kapsner/BiasCorrector/compare/v0.9.4...v0.0.899)
 
 ## v0.9.4 (2019-04-24)
 
-
-Full set of changes: [`v0.9.3...v0.9.4`](https://github.com/kapsner/BiasCorrector/compare/v0.9.3...v0.9.4)
+Full set of changes:
+[`v0.9.3...v0.9.4`](https://github.com/kapsner/BiasCorrector/compare/v0.9.3...v0.9.4)
 
 ## v0.9.3 (2019-04-18)
 
-
-Full set of changes: [`v0.9.2...v0.9.3`](https://github.com/kapsner/BiasCorrector/compare/v0.9.2...v0.9.3)
-
 ## v0.9.2 (2019-04-18)
 
-
-Full set of changes: [`v0.9.1...v0.9.2`](https://github.com/kapsner/BiasCorrector/compare/v0.9.1...v0.9.2)
+Full set of changes:
+[`v0.9.1...v0.9.2`](https://github.com/kapsner/BiasCorrector/compare/v0.9.1...v0.9.2)
 
 ## v0.9.1 (2019-03-02)
 
-
-Full set of changes: [`v0.9.0...v0.9.1`](https://github.com/kapsner/BiasCorrector/compare/v0.9.0...v0.9.1)
+Full set of changes:
+[`v0.9.0...v0.9.1`](https://github.com/kapsner/BiasCorrector/compare/v0.9.0...v0.9.1)
 
 ## v0.9.0 (2019-01-26)
 
+Full set of changes:
+[`575732f...v0.9.0`](https://github.com/kapsner/BiasCorrector/compare/575732f...v0.9.0)

README.md

@@ -3,7 +3,7 @@
 <!-- badges: start -->
 [![](https://img.shields.io/badge/doi-10.1002/ijc.33681-yellow.svg)](https://doi.org/10.1002/ijc.33681)
 [![CRAN Status Badge](https://www.r-pkg.org/badges/version-ago/BiasCorrector)](https://cran.r-project.org/package=BiasCorrector)
-[![CRAN Checks](https://cranchecks.info/badges/worst/BiasCorrector)](https://cran.r-project.org/web/checks/check_results_BiasCorrector.html)
+[![CRAN Checks](https://badges.cranchecks.info/worst/BiasCorrector.svg)](https://cran.r-project.org/web/checks/check_results_BiasCorrector.html)
 [![](http://cranlogs.r-pkg.org/badges/grand-total/BiasCorrector?color=blue)](https://cran.r-project.org/package=BiasCorrector)
 [![](http://cranlogs.r-pkg.org/badges/last-month/BiasCorrector?color=blue)](https://cran.r-project.org/package=BiasCorrector)
 [![Dependencies](https://tinyverse.netlify.com/badge/BiasCorrector)](https://cran.r-project.org/package=BiasCorrector)

data-raw/devstuffs.R

@@ -18,7 +18,7 @@ my_desc$set_authors(c(
 my_desc$del("Maintainer")
 my_desc$del("LazyData")
 # Set the version
-my_desc$set_version("0.2.2")
+my_desc$set_version("0.2.2.9001")
 # The title of your package
 my_desc$set(Title = "A GUI to Correct Measurement Bias in DNA Methylation Analyses")
 # The description of your package
@@ -114,12 +114,9 @@ usethis::use_tidy_description()
 # build|ci|docs|feat|fix|perf|refactor|test
 
 # https://github.com/gitpython-developers/GitPython/issues/1016#issuecomment-1104114129
-system(
-  command = paste0("git config --global --add safe.directory ", getwd())
-)
-system(
-  command = 'auto-changelog -u -t "BiasCorrector NEWS" --tag-prefix "v" -o "NEWS.md"'
-)
+an <- autonewsmd::autonewsmd$new(repo_name = packagename)
+an$generate()
+an$write(force = TRUE)
 
 # eventually move to nloptr for non linear optimization
 badger::badge_doi("10.1002/ijc.33681", "yellow")