Get survstat status #9

	name: "prepare-plot-data"
	on:
	workflow_dispatch:
	# schedule:
	# - cron: "30 11,12,13,14 * * *"
	push:
	branches:
	- main
	paths:
	- submissions/icosari/sari/KIT-MeanEnsemble/*.csv

	jobs:
	prepare-plot-data:
	runs-on: ubuntu-latest
	steps:
	- name: Checkout
	uses: actions/checkout@main
	with:
	persist-credentials: false # otherwise, the token used is the GITHUB_TOKEN, instead of your personal access token.

	- name: Setup R
	uses: r-lib/actions/setup-r@v2
	with:
	r-version: '4.2.3'

	- name: Prepare plot data
	run: \|
	Rscript ./code/generate_plot_data.R

	- name: Commit files
	env:
	AUTH: ${{ secrets.PAT_DW }}
	run: \|
	git config --local user.email "action@github.com"
	git config --local user.name "GitHub Action"
	git remote rm origin
	git remote add origin https://${AUTH}@github.com/KITmetricslab/RESPINOW-Hub.git > /dev/null 2>&1
	git pull origin main
	git add --all
	git commit --allow-empty -m "Update plot data"

	- name: Push changes
	run: \|
	git push --quiet --set-upstream origin HEAD:main
	echo "pushed to github"

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