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@evanbiederstedt evanbiederstedt released this 03 Feb 22:18
v1.0.0
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Learn about vigilant mode.

Pagoda2 is now on CRAN, and all binaries are built: https://cran.r-project.org/web/packages/pagoda2/index.html

  • The classes Pagoda2() and p2ViewPagodaApp() are now R6 classes; note pagoda2WebApp() is still a reference class as it depends on Rook
  • Vignettes revised
  • Use p2data and drat to install PBMC data for pagoda2 vignettes and examples. This was largely due to the size of the data and CRAN rules. Refer to https://github.com/kharchenkolab/p2data & https://github.com/kharchenkolab/drat
  • revise message() spacing for verbose statements
  • various changes for CRAN, e.g. par(), removing calls to installed.packages(), etc.
  • p2app4conos() moved to conos
  • more detailed roxygen2 docs
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