update for pomp v5

kingaa · Apr 6, 2023 · 8082e33 · 8082e33
1 parent 8dc989b
commit 8082e33
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diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,8 +1,8 @@
 Package: circumstance
 Type: Package
 Title: pomp parallelized
-Version: 0.0.5.2
-Date: 2023-01-28
+Version: 0.0.5.3
+Date: 2023-04-06
 Maintainer: Aaron A. King <kingaa@umich.edu>
 Description: Helper functions for parallelizing pomp computations.
 Authors@R: c(person(given=c("Aaron","A."),family="King",

diff --git a/tests/mif2-01.png b/tests/mif2-01.png
diff --git a/tests/mif2-02.png b/tests/mif2-02.png
diff --git a/tests/mif2-03.png b/tests/mif2-03.png
diff --git a/tests/mif2-04.png b/tests/mif2-04.png
diff --git a/tests/mif2.R b/tests/mif2.R
@@ -35,7 +35,7 @@ mfs |>
   mutate(iteration=as.integer(iteration)) |>
   ggplot(aes(x=iteration,y=value,group=.L1))+
   geom_line()+
-  facet_grid(variable~.,scales="free_y")+
+  facet_grid(name~.,scales="free_y")+
   theme_bw()
 
 mfs |>
@@ -51,7 +51,7 @@ mfs |>
   mutate(iteration=as.integer(iteration)) |>
   ggplot(aes(x=iteration,y=value,group=.L1))+
   geom_line()+
-  facet_grid(variable~.,scales="free_y")+
+  facet_grid(name~.,scales="free_y")+
   theme_bw()
 
 mfs |>
@@ -72,7 +72,7 @@ mfs |>
   mutate(iteration=as.integer(iteration)) |>
   ggplot(aes(x=iteration,y=value,group=.L1))+
   geom_line()+
-  facet_grid(variable~.,scales="free_y")+
+  facet_grid(name~.,scales="free_y")+
   theme_bw()
 
 mfs |>
@@ -88,7 +88,7 @@ mfs |>
   mutate(iteration=as.integer(iteration)) |>
   ggplot(aes(x=iteration,y=value,group=.L1))+
   geom_line()+
-  facet_grid(variable~.,scales="free_y")+
+  facet_grid(name~.,scales="free_y")+
   theme_bw()
 
 dev.off()
diff --git a/tests/mif2.Rout.save b/tests/mif2.Rout.save
@@ -1,6 +1,6 @@
 
-R version 4.2.2 (2022-10-31) -- "Innocent and Trusting"
-Copyright (C) 2022 The R Foundation for Statistical Computing
+R version 4.2.3 (2023-03-15) -- "Shortstop Beagle"
+Copyright (C) 2023 The R Foundation for Statistical Computing
 Platform: x86_64-pc-linux-gnu (64-bit)
 
 R is free software and comes with ABSOLUTELY NO WARRANTY.
@@ -84,7 +84,7 @@ Loading required package: rngtools
 +   mutate(iteration=as.integer(iteration)) |>
 +   ggplot(aes(x=iteration,y=value,group=.L1))+
 +   geom_line()+
-+   facet_grid(variable~.,scales="free_y")+
++   facet_grid(name~.,scales="free_y")+
 +   theme_bw()
 Warning message:
 Removed 3 rows containing missing values (`geom_line()`). 
@@ -111,7 +111,7 @@ Removed 3 rows containing missing values (`geom_line()`).
 +   mutate(iteration=as.integer(iteration)) |>
 +   ggplot(aes(x=iteration,y=value,group=.L1))+
 +   geom_line()+
-+   facet_grid(variable~.,scales="free_y")+
++   facet_grid(name~.,scales="free_y")+
 +   theme_bw()
 Warning message:
 Removed 3 rows containing missing values (`geom_line()`). 
@@ -141,7 +141,7 @@ Removed 3 rows containing missing values (`geom_line()`).
 +   mutate(iteration=as.integer(iteration)) |>
 +   ggplot(aes(x=iteration,y=value,group=.L1))+
 +   geom_line()+
-+   facet_grid(variable~.,scales="free_y")+
++   facet_grid(name~.,scales="free_y")+
 +   theme_bw()
 Warning message:
 Removed 3 rows containing missing values (`geom_line()`). 
@@ -159,7 +159,7 @@ Removed 3 rows containing missing values (`geom_line()`).
 +   mutate(iteration=as.integer(iteration)) |>
 +   ggplot(aes(x=iteration,y=value,group=.L1))+
 +   geom_line()+
-+   facet_grid(variable~.,scales="free_y")+
++   facet_grid(name~.,scales="free_y")+
 +   theme_bw()
 Warning message:
 Removed 3 rows containing missing values (`geom_line()`). 

diff --git a/tests/pfilter.Rout.save b/tests/pfilter.Rout.save
@@ -1,6 +1,6 @@
 
-R version 4.2.2 (2022-10-31) -- "Innocent and Trusting"
-Copyright (C) 2022 The R Foundation for Statistical Computing
+R version 4.2.3 (2023-03-15) -- "Shortstop Beagle"
+Copyright (C) 2023 The R Foundation for Statistical Computing
 Platform: x86_64-pc-linux-gnu (64-bit)
 
 R is free software and comes with ABSOLUTELY NO WARRANTY.