v0.4.0-alpha
·
543 commits
to master
since this release
Added
- VCF output for Illumina reads via CliqueSNV (#18)
- Parameter schema in Nextflow schema format (#19)
- Phylogenetic tree quality cutoff parameter (#20)
Changes
- HapLink.jl updated to 0.4 (#16)
- ONT reads now simulated using https://github.com/yukiteruono/pbsim2 (#17)
- Docs now stay in sync with docstrings/
nextflow_schema.json(#10)
Fixed
- It is now nearly impossible to receive cooldown timeouts from NCBI (#15)