Ready for release 1.3.0

.Rbuildignore

@@ -1,3 +1,5 @@
+revdep
+joss_paper
 data-raw
 ^cran-comments\.md$
 ^\.github$

.gitignore

@@ -4,3 +4,4 @@ inst/doc
 /doc/
 /Meta/
 .run_codecov.R
+revdep

DESCRIPTION

@@ -1,7 +1,7 @@
 Package: growR
 Type: Package
-Version: 1.2.0.9005
-Date: 2023-11-21
+Version: 1.3.0
+Date: 2024-05-23
 Authors@R: person(
     given = "Kevin",
     family = "Kramer",

NEWS.md

@@ -1,10 +1,10 @@
-# growR 1.2.0.9000
+# growR 1.3.0
 
 ## Added
 
-* Additional option for determination of growing season start is available 
+* An additional option for determination of growing season start is available 
   through `ModvegeSite$set_SGS_method. This comes with a different available 
-  definition of the temperature sum and is reflected in the methods 
+  definition of the temperature sum and is reflected in the new methods 
   `start_of_growing_season`, `start_of_growing_season_mtd`, 
   `weighted_temperature_sum`.
 

README.md

@@ -4,7 +4,7 @@
   [![Documentation](https://badgen.net/badge/Documentation/github.io/cyan)](https://kuadrat.github.io/growR/)
   [![R-CMD-check](https://github.com/kuadrat/growR/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/kuadrat/growR/actions/workflows/R-CMD-check.yaml)
   [![codecov](https://codecov.io/gh/kuadrat/growR/graph/badge.svg?token=65OACJW5FV)](https://app.codecov.io/gh/kuadrat/growR)
-  [![status](https://joss.theoj.org/papers/bd4b3a207a8d4de1dc784dba702e38fc/status.svg)](https://joss.theoj.org/papers/bd4b3a207a8d4de1dc784dba702e38fc)
+  [![status](https://joss.theoj.org/papers/bd4b3a207a8d4de1dc784dba702e38fc/status.svg)](https://joss.theoj.org/papers/10.21105/joss.06260)
 <!-- badges: end -->
 
 ![](man/figures/logo.png)

_pkgdown.yml

@@ -94,4 +94,8 @@ reference:
   - parse_year_strings
   - posieux_weather
   - set_growR_verbosity
+  - start_of_growing_season
+  - start_of_growing_season_mtd
+  - weighted_temperature_sum
   - yield_parameters
+

cran-comments.md

@@ -0,0 +1,48 @@
+## R CMD check results
+
+0 errors | 0 warnings | 0-2 notes
+
+* ```
+  checking CRAN incoming feasibility ...Warning: unable to access index for repository https://bioconductor.org/packages/3.16/bioc/src/contrib:
+    cannot open URL 'https://bioconductor.org/packages/3.16/bioc/src/contrib/PACKAGES'
+  Warning: unable to access index for repository https://bioconductor.org/packages/3.16/data/annotation/src/contrib:
+    cannot open URL 'https://bioconductor.org/packages/3.16/data/annotation/src/contrib/PACKAGES'
+  Warning: unable to access index for repository https://bioconductor.org/packages/3.16/data/experiment/src/contrib:
+    cannot open URL 'https://bioconductor.org/packages/3.16/data/experiment/src/contrib/PACKAGES'
+  Warning in url(sprintf("%s/src/contrib/PACKAGES.gz", u), "rb") :
+    URL 'https://mghp.osn.xsede.org/bir190004-bucket01/archive.bioconductor.org/packages/3.16/bioc/src/contrib/PACKAGES.gz': Timeout of 60 seconds was reached
+  NB: need Internet access to use CRAN incoming checks
+   NOTE
+  Maintainer: ‘Kevin Kramer <kevin.pasqual.kramer@protonmail.ch>’
+   
+   Possibly misspelled words in DESCRIPTION:
+     Baumont (13:48)
+     Carrère (13:32)
+     Jouven (13:17)
+     ModVege (11:47, 13:8, 17:73)
+  ```
+
+  bioconductor seems to be unreachable from my location. However, growR does 
+  not depend or (to my knowledge) interact with bioconductor at all, so this 
+  should not be cause for an issue.
+  The spelling of these words (names) is fine.
+
+* ```
+  Found the following (possibly) invalid URLs:
+     URL: https://rmets.onlinelibrary.wiley.com/doi/abs/10.1002/joc.2419
+       From: man/willmott.Rd
+       Status: 403
+       Message: Forbidden
+  ```
+
+  It seems that Wiley has recently started to use more extensive CAPTCHA and 
+  similar human-verification checks. This seems to sometimes (and only 
+  sometimes) prevent R CMD CHECK from accessing these links.
+
+## revdepcheck results
+
+We checked 0 reverse dependencies, comparing R CMD check results across CRAN and dev versions of this package.
+
+ * We saw 0 new problems
+ * We failed to check 0 packages
+