Update joss branch to v1.2.0 release - including paper

joss_paper/paper.bib

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+@article{zhao2020GrasslandEcosystemServices,
+  title = {Grassland Ecosystem Services: A Systematic Review of Research Advances and Future Directions},
+  shorttitle = {Grassland Ecosystem Services},
+  author = {Zhao, Yuanyuan and Liu, Zhifeng and Wu, Jianguo},
+  year = {2020},
+  month = apr,
+  journal = {Landscape Ecology},
+  volume = {35},
+  number = {4},
+  pages = {793--814},
+  publisher = {{Springer Netherlands}},
+  issn = {1572-9761},
+  doi = {10.1007/s10980-020-00980-3},
+  urldate = {2023-04-06},
+  copyright = {2020 Springer Nature B.V.},
+  langid = {english},
+  keywords = {read}
+}
+
+@article{herrero2013BiomassUseProduction,
+  title = {Biomass Use, Production, Feed Efficiencies, and Greenhouse Gas Emissions from Global Livestock Systems},
+  author = {Herrero, Mario and Havl{\'i}k, Petr and Valin, Hugo and Notenbaert, An and Rufino, Mariana C. and Thornton, Philip K. and Bl{\"u}mmel, Michael and Weiss, Franz and Grace, Delia and Obersteiner, Michael},
+  year = {2013},
+  month = dec,
+  journal = {Proceedings of the National Academy of Sciences},
+  volume = {110},
+  number = {52},
+  pages = {20888--20893},
+  publisher = {{Proceedings of the National Academy of Sciences}},
+  doi = {10.1073/pnas.1308149110},
+  urldate = {2023-12-04}
+}
+
+@article{zhao2020GrasslandEcosystemServices,
+  title = {Grassland Ecosystem Services: A Systematic Review of Research Advances and Future Directions},
+  shorttitle = {Grassland Ecosystem Services},
+  author = {Zhao, Yuanyuan and Liu, Zhifeng and Wu, Jianguo},
+  year = {2020},
+  month = apr,
+  journal = {Landscape Ecology},
+  volume = {35},
+  number = {4},
+  pages = {793--814},
+  publisher = {{Springer Netherlands}},
+  issn = {1572-9761},
+  doi = {10.1007/s10980-020-00980-3},
+  urldate = {2023-04-06},
+  copyright = {2020 Springer Nature B.V.},
+  langid = {english}
+}
+
+@inbook{IPCC2022Chapter05,
+  author = {Bezner Kerr, R. and Hasegawa, T. and Lasco, R. and Bhatt, I. and Deryng, D. and Farrell, A. and Gurney-Smith, H. and Ju, H. and Lluch-Cota, S. and Meza, F. and Nelson, G. and Neufeldt, H. and Thornton, P.},
+  title = {Food, Fibre, and Other Ecosystem Products},
+  booktitle = {Climate Change 2022: Impacts, Adaptation and Vulnerability. Contribution of Working Group II to the Sixth Assessment Report of the Intergovernmental Panel on Climate Change},
+  editor = {Pörtner, H. O. and Roberts, D. C. and Tignor, M. and Poloczanska, E. S. and Mintenbeck, K. and Alegría, A. and Craig, M. and Langsdorf, S. and Löschke, S. and Möller, V. and Okem, A. and Rama, B.},
+  publisher = {Cambridge University Press},
+  address = {Cambridge, UK and New York, USA},
+  pages = {713-906},
+  ISBN = {9781009325844},
+  DOI = {10.1017/9781009325844.007.714},
+  year = {2022},
+  type = {Book Section}
+}
+
+@book{thornley1998GrasslandDynamicsEcosystem,
+  title = {Grassland {{Dynamics}}: {{An Ecosystem Simulation Model}}},
+  shorttitle = {Grassland {{Dynamics}}},
+  author = {Thornley, J. H. M.},
+  year = {1998},
+  publisher = {{CAB International}},
+  googlebooks = {aULwAAAAMAAJ},
+  isbn = {978-0-85199-227-3},
+  langid = {english},
+  keywords = {Computers / Data Science / Data Modeling \& Design,Science / Environmental Science,Science / Life Sciences / Ecology}
+}
+
+@article{thornley1997TemperateGrasslandResponses,
+  title = {Temperate {{Grassland Responses}} to {{Climate Change}}: An {{Analysis}} Using the {{Hurley Pasture Model}}},
+  shorttitle = {Temperate {{Grassland Responses}} to {{Climate Change}}},
+  author = {Thornley, J. H. M. and Cannell, M. G. R.},
+  year = {1997},
+  month = aug,
+  journal = {Annals of Botany},
+  volume = {80},
+  number = {2},
+  pages = {205--221},
+  issn = {0305-7364},
+  doi = {10.1006/anbo.1997.0430},
+  urldate = {2023-10-26},
+  keywords = {hurley pasture model,read,source of references}
+}
+
+@article{jenkinson1994TrendsHerbageYields,
+  title = {Trends in Herbage Yields over the Last Century on the {{Rothamsted Long-term Continuous Hay Experiment}}},
+  author = {Jenkinson, D. S. and Potts, J. M. and Perry, J. N. and Barnett, V. and Coleman, K. and Johnston, A. E.},
+  year = {1994},
+  month = jun,
+  journal = {The Journal of Agricultural Science},
+  volume = {122},
+  number = {3},
+  pages = {365--374},
+  publisher = {{Cambridge University Press}},
+  issn = {1469-5146, 0021-8596},
+  doi = {10.1017/S0021859600067290},
+  urldate = {2023-12-04},
+  langid = {english},
+  keywords = {RothC}
+}
+
+@article{jouven2006ModelPredictingDynamics,
+  title = {Model Predicting Dynamics of Biomass, Structure and Digestibility of Herbage in Managed Permanent Pastures. 1. {{Model}} Description},
+  author = {Jouven, M. and Carr{\`e}re, P. and Baumont, R.},
+  year = {2006},
+  journal = {Grass and Forage Science},
+  volume = {61},
+  number = {2},
+  pages = {112--124},
+  issn = {1365-2494},
+  doi = {10.1111/j.1365-2494.2006.00515.x},
+  urldate = {2023-01-04},
+  langid = {english},
+  keywords = {functional traits,mechanistic dynamic model,permanent grassland}
+}
+
+@article{ruelle2018DevelopmentMooreparkSt,
+  title = {Development of the {{Moorepark St Gilles}} Grass Growth Model ({{MoSt GG}} Model): {{A}} Predictive Model for Grass Growth for Pasture Based Systems},
+  shorttitle = {Development of the {{Moorepark St Gilles}} Grass Growth Model ({{MoSt GG}} Model)},
+  author = {Ruelle, E. and Hennessy, D. and Delaby, L.},
+  year = {2018},
+  month = sep,
+  journal = {European Journal of Agronomy},
+  volume = {99},
+  pages = {80--91},
+  issn = {1161-0301},
+  doi = {10.1016/j.eja.2018.06.010},
+  urldate = {2023-11-03},
+  keywords = {Grass growth model,Grazing,Nitrogen fluxes,readlist,Soil model}
+}
+
+@article{kokah2023ModelingDailyDynamics,
+  title = {Modeling the Daily Dynamics of Grass Growth of Several Species According to Their Functional Type, Based on Soil Water and Nitrogen Dynamics: {{Gras-sim}} Model Definition, Parametrization and Evaluation},
+  shorttitle = {Modeling the Daily Dynamics of Grass Growth of Several Species According to Their Functional Type, Based on Soil Water and Nitrogen Dynamics},
+  author = {Kokah, Essomandan Urbain and Knoden, David and Lambert, Richard and Himdi, Hamza and Dumont, Benjamin and Bindelle, J{\'e}r{\^o}me},
+  year = {2023},
+  month = nov,
+  journal = {Journal of Agriculture and Food Research},
+  pages = {100875},
+  issn = {2666-1543},
+  doi = {10.1016/j.jafr.2023.100875},
+  urldate = {2023-11-20},
+  keywords = {Biomass,Functional group,Grassland,Model,modvege,Nitrogen,readlist,Water}
+}
+
+@book{rcoreteam2021LanguageEnvironmentStatistical,
+  title = {R: {{A Language Environment}} for {{Statistical Computing}}},
+  author = {{R Core Team}},
+  year = {2021},
+  publisher = {{R Foundation for Statistical Computing}},
+  address = {{Vienna, Austria}},
+  url = {https://www.R-project.org/}
+}
+
+@article{calanca2016TestingAbilitySimple,
+  title = {Testing the Ability of a Simple Grassland Model to Simulate the Seasonal Effects of Drought on Herbage Growth},
+  author = {Calanca, Pierluigi and Del{\'e}glise, Claire and Martin, Rapha{\"e}l and Carr{\`e}re, Pascal and Mosimann, Eric},
+  year = {2016},
+  month = feb,
+  journal = {Field Crops Research},
+  volume = {187},
+  pages = {12--23},
+  issn = {03784290},
+  doi = {10.1016/j.fcr.2015.12.008},
+  urldate = {2022-12-22},
+  langid = {english}
+}
+
+@article{petersen2021DynamicSimulationManagement,
+  title = {Dynamic Simulation of Management Events for Assessing Impacts of Climate Change on Pre-Alpine Grassland Productivity},
+  author = {Petersen, Krischan and Kraus, David and Calanca, Pierluigi and Semenov, Mikhail A. and {Butterbach-Bahl}, Klaus and Kiese, Ralf},
+  year = {2021},
+  month = aug,
+  journal = {European Journal of Agronomy},
+  volume = {128},
+  pages = {126306},
+  issn = {1161-0301},
+  doi = {10.1016/j.eja.2021.126306},
+  urldate = {2023-04-25},
+  langid = {english},
+  keywords = {Adaptive management,Biomass yields,carbon sequestration,Mountainous grasslands,Process-based modelling}
+}
+
+@article{hugueninElie2017DuengungGrasland,
+  title = {{Grundlagen f{\"u}r die D{\"u}ngung landwirtschaftlicher Kulturen in der Schweiz (GRUD)}},
+  author = {{Huguenin-Elie}, Olivier and Mosimann, Eric and Schlegel, Patrick and L{\"u}scher, Andreas and Kessler, Willy and Jeangros, Bernard},
+  year = {2017},
+  series = {{Spezialpublikation}},
+  volume = {9},
+  pages = {1--22},
+  publisher = {{Agrarforschung Schweiz}},
+  urldate = {2023-05-24},
+  isbn = {1663-7852},
+}
+
+@book{soltani2012ModelingPhysiologyCrop,
+  title = {Modeling {{Physiology}} of {{Crop Development}}, {{Growth}} and {{Yield}}},
+  author = {Soltani, Afshin and Sinclair, Thomas R},
+  year = {2012},
+  month = jan,
+  publisher = {{CABI}},
+  googlebooks = {xnHT6YOlk00C},
+  isbn = {978-1-84593-971-7},
+  langid = {english},
+}
+
+@article{kellner2017CoupledHydrologicalplantGrowth,
+  title = {A Coupled Hydrological-Plant Growth Model for Simulating the Effect of Elevated {{CO2}} on a Temperate Grassland},
+  author = {Kellner, Juliane and Multsch, Sebastian and Houska, Tobias and Kraft, Philipp and M{\"u}ller, Christoph and Breuer, Lutz},
+  year = {2017},
+  month = nov,
+  journal = {Agricultural and Forest Meteorology},
+  volume = {246},
+  pages = {42--50},
+  issn = {0168-1923},
+  doi = {10.1016/j.agrformet.2017.05.017},
+  urldate = {2023-05-30},
+  langid = {english},
+  keywords = {Biomass,CO2 growth,FACE,GLUE,skimmed,soil moisture,uncertainty,water use efficiency}
+}
+
+@article{kruijt2008EffectsRisingAtmospheric,
+  title = {Effects of Rising Atmospheric {{CO2}} on Evapotranspiration and Soil Moisture: {{A}} Practical Approach for the {{Netherlands}}},
+  shorttitle = {Effects of Rising Atmospheric {{CO2}} on Evapotranspiration and Soil Moisture},
+  author = {Kruijt, Bart and Witte, Jan-Philip M. and Jacobs, Cor M. J. and Kroon, Timo},
+  year = {2008},
+  month = feb,
+  journal = {Journal of Hydrology},
+  volume = {349},
+  number = {3},
+  pages = {257--267},
+  issn = {0022-1694},
+  doi = {10.1016/j.jhydrol.2007.10.052},
+  urldate = {2023-04-25},
+  langid = {english}
+}
+
+@phdthesis{schaumberger2011RaeumlicheModelleZur,
+  title = {{R{\"a}umliche Modelle zur Vegetations- und Ertragsdynamik im Wirtschaftsgr{\"u}nland}},
+  author = {Schaumberger, Andreas},
+  year = {2011},
+  langid = {ngerman},
+  school = {Technische Universit{\"a}t Graz},
+  annotation = {ISBN-13: 978-3-902559-67-8}
+}
+
+@inproceedings{kokkonen2006ConstructionDegreedaySnow,
+  title = {Construction of a Degree-Day Snow Model in the Light of the Ten Iterative Steps in Model Development},
+  booktitle = {{{iEMSs}} Third Biennial Meeting: "{{Summit}} on {{Environmental Modelling}} and {{Software}}". {{International}} Environmental Modelling and Software Society, Burlington, {{USA}}, July 2006},
+  author = {Kokkonen, Teemu and Koivusalo, Harri and Jakeman, Anthony and Norton, John},
+  year = {2006},
+  publisher = {{International Environmental Modelling and Software Society (iEMSs)}},
+  address = {{Switzerland}},
+  langid = {english},
+  keywords = {growR,snow,snow processes}
+}
+
+@article{rango1995RevisitingDegreeDayMethod,
+  title = {Revisiting the {{Degree-Day Method}} for {{Snowmelt Computations}}},
+  author = {Rango, A. and Martinec, J.},
+  year = {1995},
+  journal = {JAWRA Journal of the American Water Resources Association},
+  volume = {31},
+  number = {4},
+  pages = {657--669},
+  issn = {1752-1688},
+  doi = {10.1111/j.1752-1688.1995.tb03392.x},
+  urldate = {2023-12-13},
+  langid = {english},
+  keywords = {degree-day method,growR,hydrograph analysis and modeling,snow,snow and ice hydrology,snowmelt}
+}
+
+@article{hoglind2020BASGRAModelGrassland,
+  title = {{{BASGRA}}\_{{N}}: {{A}} Model for Grassland Productivity, Quality and Greenhouse Gas Balance},
+  shorttitle = {{{BASGRA}}\_{{N}}},
+  author = {H{\"o}glind, Mats and Cameron, David and Persson, Tomas and Huang, Xiao and {van Oijen}, Marcel},
+  year = {2020},
+  month = feb,
+  journal = {Ecological Modelling},
+  volume = {417},
+  pages = {108925},
+  issn = {0304-3800},
+  doi = {10.1016/j.ecolmodel.2019.108925},
+  urldate = {2023-04-20},
+  langid = {english},
+}
+
+@misc{vanoijen2015BASGRA_2014,
+  title = {{{BASGRA}}\_2014},
+  author = {Van Oijen, M. and H{\"o}glind, M. and Cameron, D.R. and Thorsen, S.M.},
+  year = {2015},
+  month = aug,
+  doi = {10.5281/zenodo.27867},
+  urldate = {2023-12-13},
+  abstract = {This is the first public release of BASGRA, the BASic GRAssland model, developed jointly by Marcel van Oijen, Mats H{\"o}glind, David Cameron and Stig Morten Thorsen. A full description of the model can be found in the User Guide included in this release.},
+  howpublished = {Zenodo},
+  keywords = {Grassland model}
+}
+
+@article{moore1997GRAZPLANDecisionSupport,
+  title = {{{GRAZPLAN}}: {{Decision}} Support Systems for {{Australian}} Grazing Enterprises. {{III}}. {{Pasture}} Growth and Soil Moisture Submodels, and the {{GrassGro DSS}}},
+  shorttitle = {{{GRAZPLAN}}},
+  author = {Moore, A. D. and Donnelly, J. R. and Freer, M.},
+  year = {1997},
+  month = dec,
+  journal = {Agricultural Systems},
+  volume = {55},
+  number = {4},
+  pages = {535--582},
+  issn = {0308-521X},
+  doi = {10.1016/S0308-521X(97)00023-1},
+  urldate = {2023-12-13},
+}
+
+@article{lazzarotto2009DynamicsGrassClover,
+  title = {Dynamics of Grass{\textendash}Clover Mixtures{\textemdash}{{An}} Analysis of the Response to Management with the {{PROductive GRASsland Simulator}} ({{PROGRASS}})},
+  author = {Lazzarotto, P. and Calanca, P. and Fuhrer, J.},
+  year = {2009},
+  month = mar,
+  journal = {Ecological Modelling},
+  volume = {220},
+  number = {5},
+  pages = {703--724},
+  issn = {0304-3800},
+  doi = {10.1016/j.ecolmodel.2008.11.023},
+  urldate = {2023-05-24},
+  langid = {english},
+  keywords = {Allocation,Feedback mechanisms,Fertilization,Grass/clover interactions,Grassland model,PROGRASS,Root development},
+}
+
+@article{graux2011DevelopmentPastureSimulation,
+  title = {Development of the {{Pasture Simulation Model}} for Assessing Livestock Production under Climate Change},
+  author = {Graux, A. -I. and Gaurut, M. and Agabriel, J. and Baumont, R. and Delagarde, R. and Delaby, L. and Soussana, J. -F.},
+  year = {2011},
+  month = nov,
+  journal = {Agriculture, Ecosystems \& Environment},
+  volume = {144},
+  number = {1},
+  pages = {69--91},
+  issn = {0167-8809},
+  doi = {10.1016/j.agee.2011.07.001},
+  urldate = {2023-12-13},
+  keywords = {Biogeochemical cycles,CH emission,Grassland,Grazing,Ruminants},
+}
+