PanGBank-cli 0.1.1

PanGBank-cli v0.1.1

• Updated dependencies: pangbank-api is now referenced from PyPI instead of a GitHub link in PR #2
• Added a workflow to publish the package to PyPI in PR #3

Full Changelog: 0.1.0...0.1.1

PanGBank-cli 0.1.0

This is the first release of PanGBank-cli, a command-line tool for searching, retrieving, and downloading pangenomes from PanGBank API.

Features

• 🔍 Search pangenomes by taxon, genome, or collection
  Query PanGBank API to find relevant pangenomes matching specific criteria.

• 📊 Retrieve pangenome metrics
  Access information on pangenomes, including taxonomy, number of genomes, gene counts, and other statistics.

• 💾 Download pangenome files
  Fetch pangenome files directly from PanGBank for downstream analysis with PPanGGOLiN.

• 🧬 Match an input genome to a pangenome
  Identify the most similar pangenome to a given genome using mash sketches of the selected collection.