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Ryan/dev #60

Merged
merged 3 commits into from
Aug 16, 2023
Merged

Ryan/dev #60

merged 3 commits into from
Aug 16, 2023

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Ryan-Rhys
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Reference Issues/PRs

What does this implement/fix? Explain your changes

Implements:

  1. Dice Kernel
  2. Forbes Kernel
  3. Faith Kernel
  4. Intersection Kernel
  5. Inner Product Kernel
  6. Braun-Blanquet Kernel
  7. Rogers-Tanimoto Kernel
  8. Russell-Rao Kernel
  9. Sogenfrei Kernel
  10. Sokal-Sneath Kernel
  11. Rand Kernel
  12. Otsuka Kernel

What testing did you do to verify the changes in this PR?

Test suite for each kernel.

Pull Request Checklist

  • Added a note about the modification or contribution to the ./CHANGELOG.md file (if applicable)
  • Added appropriate unit test functions in the ./gauche/tests/* directories (if applicable)
  • Modify documentation in the corresponding Jupyter Notebook under ./notebooks/ (if applicable)
  • Ran python -m py.test tests/ and make sure that all unit tests pass (for small modifications, it might be sufficient to only run the specific test file, e.g., python -m py.test tests/kernels/test_graph_kernels.py)
  • Checked for style issues by running black . and isort .

1. Dice Kernel
2. Otsuka Kernel
3. Rogers-Tanimoto Kernel
4. Faith kernel
5. Forbes Kernel
6. Sogenfrei Kernel
7. Braun-Blanquet Kernel
8. Russell-Rao Kernel
9. Sokal-Sneath Kernel
10. Inner Product Kernel
11. Intersection Kernel
12. Rand Kernel
@Ryan-Rhys Ryan-Rhys merged commit 628c2a2 into leojklarner:main Aug 16, 2023
0 of 4 checks passed
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