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Add CI workflow that tests using conda libsemigroups #322

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2249fdb
CI: Lint in separate workflow
Joseph-Edwards Sep 2, 2025
8cab3db
CI: Add tests using conda libsemigroups
Joseph-Edwards Sep 2, 2025
b2c21d2
CI: Don't use external fmt
Joseph-Edwards Sep 2, 2025
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3 changes: 1 addition & 2 deletions .github/workflows/doc.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -32,7 +32,6 @@ jobs:
environment-name: libsemigroups
create-args: >-
python
fmt
- name: "Set environment variables . . ."
run: |
echo "PKG_CONFIG_PATH=$MAMBA_ROOT_PREFIX/envs/libsemigroups/lib/pkgconfig:$MAMBA_ROOT_PREFIX/envs/libsemigroups/share/pkgconfig:/usr/local/lib/pkgconfig" >> $GITHUB_ENV
Expand All @@ -50,7 +49,7 @@ jobs:
run: |
git clone --depth 1 --branch main https://github.com/libsemigroups/libsemigroups.git
cd libsemigroups
./autogen.sh && ./configure CXX="$CXX" CXXFLAGS="$CXXFLAGS" --disable-hpcombi --with-external-fmt && sudo make install -j8
./autogen.sh && ./configure CXX="$CXX" CXXFLAGS="$CXXFLAGS" --disable-hpcombi && sudo make install -j8
ccache -s
- name: "Python version . . ."
run: |
Expand Down
67 changes: 67 additions & 0 deletions .github/workflows/lint.yml
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Original file line number Diff line number Diff line change
@@ -0,0 +1,67 @@
name: Lint
on: [pull_request, workflow_dispatch]

concurrency:
group: ${{ github.workflow }}-${{ github.ref }}
cancel-in-progress: true

jobs:
run-tests:
name: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
os: [ubuntu-latest, macOS-latest]
include:
- os: ubuntu-latest
compiler: g++
- os: macOS-latest
compiler: clang++
runs-on: ${{ matrix.os }}
timeout-minutes: 15
defaults:
run:
shell: bash -l {0}
env:
CXX: "ccache ${{ matrix.compiler }}"
CXXFLAGS: "-O2 -g"
steps:
- uses: actions/checkout@v5
- name: "Create micromamba environment"
uses: mamba-org/setup-micromamba@v2
with:
environment-name: libsemigroups
create-args: >-
python=3.13
- name: "Set environment variables . . ."
run: |
echo "PKG_CONFIG_PATH=$MAMBA_ROOT_PREFIX/envs/libsemigroups/lib/pkgconfig:$MAMBA_ROOT_PREFIX/envs/libsemigroups/share/pkgconfig:/usr/local/lib/pkgconfig" >> $GITHUB_ENV
echo "LD_LIBRARY_PATH=$MAMBA_ROOT_PREFIX/envs/libsemigroups/lib:/usr/local/lib" >> $GITHUB_ENV
echo "PATH=$MAMBA_ROOT_PREFIX/envs/libsemigroups/bin:$PATH" >> $GITHUB_ENV
- name: "macOS only: Install libsemigroups dependencies . . ."
if: ${{ matrix.os == 'macOS-latest' }}
run: brew install autoconf automake libtool
- name: "Setup ccache . . ."
uses: Chocobo1/setup-ccache-action@v1
with:
update_packager_index: false
install_ccache: true
- name: "Install libsemigroups . . ."
run: |
git clone --depth 1 --branch main https://github.com/libsemigroups/libsemigroups.git
cd libsemigroups
./autogen.sh && ./configure CXX="$CXX" CXXFLAGS="$CXXFLAGS" --disable-hpcombi && sudo make install -j8
ccache -s
- name: "Python version . . ."
run: |
python --version
pip3 --version
- name: "Pip installing requirements.txt . . ."
run: |
pip3 install -r requirements.txt
- name: "Pip3 installing libsemigroups_pybind11 . . ."
run: |
echo $PKG_CONFIG_PATH
pip3 install . -v
- name: "Running ruff, pylint and cpplint . . ."
run: make lint
60 changes: 60 additions & 0 deletions .github/workflows/test-conda.yml
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Original file line number Diff line number Diff line change
@@ -0,0 +1,60 @@
name: Run tests (Conda libsemigroups)
on: [pull_request, workflow_dispatch]

concurrency:
group: ${{ github.workflow }}-${{ github.ref }}
cancel-in-progress: true

jobs:
run-test:
name: ${{ matrix.os }}, Python ${{ matrix.python_version }}
strategy:
fail-fast: false
matrix:
python_version: ["3.9", "3.10", "3.11", "3.12", "3.13"]
os: [ubuntu-latest, macOS-latest]
include:
- os: ubuntu-latest
compiler: ccache g++
- os: macOS-latest
compiler: ccache clang++
runs-on: ${{ matrix.os }}
timeout-minutes: 15
steps:
- uses: actions/checkout@v4
- name: Setup ccache . . .
uses: Chocobo1/setup-ccache-action@v1
with:
update_packager_index: false
install_ccache: true
- name: Create micromamba environment . . .
uses: mamba-org/setup-micromamba@v2
with:
environment-name: libsemigroups
cache-environment: true
create-args: >-
python=${{ matrix.python_version }}
pip
libsemigroups
- name: Set environment variables . . .
run: |
echo "PKG_CONFIG_PATH=$MAMBA_ROOT_PREFIX/envs/libsemigroups/lib/pkgconfig:$MAMBA_ROOT_PREFIX/envs/libsemigroups/share/pkgconfig:/usr/local/lib/pkgconfig" >> $GITHUB_ENV
echo "PATH=$MAMBA_ROOT_PREFIX/envs/libsemigroups/bin:$PATH" >> $GITHUB_ENV
- name: Check Python version . . .
run: |
python --version
pip --version
- name: Install requirements . . .
run: pip install -r requirements.txt
- name: Pip install libsemigroups_pybind11 . . .
run: |
CXX="${{ matrix.compiler }}" pip install . -v
ccache -s
- name: Run tests . . .
run: |
python -m pytest -vv tests/test_*.py
- name: Run doc tests . . .
run: |
etc/make-doc.sh # so that all files are generated!
cd docs
python -m sphinx -b doctest -d _build/doctrees source _build/doctest
20 changes: 8 additions & 12 deletions .github/workflows/tests.yml → .github/workflows/test-github.yml
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Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
name: Run tests and lint
name: Run tests (GitHub libsemigroups)
on: [pull_request, workflow_dispatch]

concurrency:
Expand All @@ -7,7 +7,7 @@ concurrency:

jobs:
run-tests:
name: ${{ matrix.os }} Python ${{ matrix.python_version }}
name: ${{ matrix.os }}, Python ${{ matrix.python_version }}
strategy:
fail-fast: false
matrix:
Expand All @@ -28,13 +28,17 @@ jobs:
CXXFLAGS: "-O2 -g"
steps:
- uses: actions/checkout@v5
- name: "Setup ccache . . ."
uses: Chocobo1/setup-ccache-action@v1
with:
update_packager_index: false
install_ccache: true
- name: "Create micromamba environment"
uses: mamba-org/setup-micromamba@v2
with:
environment-name: libsemigroups
create-args: >-
python=${{ matrix.python_version }}
fmt
- name: "Set environment variables . . ."
run: |
echo "PKG_CONFIG_PATH=$MAMBA_ROOT_PREFIX/envs/libsemigroups/lib/pkgconfig:$MAMBA_ROOT_PREFIX/envs/libsemigroups/share/pkgconfig:/usr/local/lib/pkgconfig" >> $GITHUB_ENV
Expand All @@ -43,17 +47,11 @@ jobs:
- name: "macOS only: Install libsemigroups dependencies . . ."
if: ${{ matrix.os == 'macOS-latest' }}
run: brew install autoconf automake libtool
- name: "Setup ccache . . ."
uses: Chocobo1/setup-ccache-action@v1
with:
update_packager_index: false
install_ccache: true
- name: "Install libsemigroups . . ."
run: |
git clone --depth 1 --branch main https://github.com/libsemigroups/libsemigroups.git
cd libsemigroups
./autogen.sh && ./configure CXX="$CXX" CXXFLAGS="$CXXFLAGS" --disable-hpcombi --with-external-fmt && sudo make install -j8
ccache -s
./autogen.sh && ./configure CXX="$CXX" CXXFLAGS="$CXXFLAGS" --disable-hpcombi && sudo make install -j8
- name: "Python version . . ."
run: |
python --version
Expand All @@ -73,5 +71,3 @@ jobs:
etc/make-doc.sh # so that all files are generated!
cd docs
python -m sphinx -b doctest -d _build/doctrees source _build/doctest
- name: "Running ruff, pylint and cpplint . . ."
run: make lint
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