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pylcurve

This is a python wrapper of lcurve and is written by Jiao Li (lijiao@bao.ac.cn). The lcurve is for modelling of light curves which is written by Thomas Marsh. In order to use the share libary for pyclurve, a modified lcurve version is written.

  • major modification:
    • trm/lcurve.h add Pparam(double value, double range, double dstep, bool vary, bool defined) and Constructor from arguments added by lijiao Model(//Binary and stars double q_value, double q_range, double q_dstep, bool q_vary, bool q_defined,...
    • src/Makefile.am add lib_LTLIBRARIES = libpylcurve.la ...
    • src/trm_lcurve.cc add Lcurve::Model::Model(//Binary and stars...
    • add libpylcurve.cc and pylight_curve_comp.cc

'lcurve' is for modelling of light curves.

Installation order: subs --> colly, binary --> roche --> lcurve (details see https://github.com/trmrsh/cpp-lcurve)

The package of cpp-subs is based on pcre, pgplot, and slalib(C version)

installation:

  • If you are using macOS, autoconf, automake, libtool, pcre, and llvm can be installed by brew

    • brew install autoconf automake libtool pcre llvm
    • PGPLOT can be installed by using mesasdk. This is the easiest way for me to install PGPLOT
  • install the pacakages by conda, e.g.

    • $conda install -c anaconda pcre

if you install the packages by using conda, then you should modify environment file of the include and lib:

  • set environment variables (e.g. write them into ~/.bashrc, or ~/.zshrc)
    • export TRM_SOFTWARE= the_prefix_directory (e.g. "/Users/pcname/TRM_SOFTWARE/local")
    • export CPPFLAGS="-I$CONDA_PREFIX/include -I$TRM_SOFTWARE/include"
    • export LDFLAGS="-L$CONDA_PREFIX/lib -L$TRM_SOFTWARE/lib"
    • export LD_LIBRARY_PATH=$CONDA_PREFIX/lib:$LD_LIBRARY_PATH

if the dependence packages are installed by brew or the other methods (for MacOS-Silicon):

    • export PGPLOT_DIR="/Applications/mesasdk/lib/pgplot"
    • export PGPLOT_FONT="$PGPLOT_DIR/grfont.dat
    • export TRM_SOFTWARE= the_prefix_directory
    • export CPPFLAGS="-I/usr/local/include -I$TRM_SOFTWARE/include -I/opt/homebrew/include -I$PGPLOT_DIR -I$PGPLOT_DIR"
    • export LDFLAGS="-L/opt/homebrew/lib -L$TRM_SOFTWARE/lib -L$PGPLOT_DIR"
    • export LD_LIBRARY_PATH=$PGPLOT_DIR:$CONDA_PREFIX/lib:/opt/homebrew/lib:$LD_LIBRARY_PATH
  • install slalib (C version)

    • $ tar -xcf sla.tar.gz
    • $ cd sla-1.0.5
    • $ autoreconf -f -i -s
    • $ ./configure --prefix=$TRM_SOFTWARE
    • $ make install
    • $ make clean

The file called 'Lcurve' that is generated in this directory defines aliases (csh-style) and prints a help message when sourced.

https://cygnus.astro.warwick.ac.uk/phsaap/software

  • 1st, install subs (can be download from cpp-subs)

    • $ cd cpp-subs
    • $ autoreconf -f -i -s
    • $ ./configure --prefix=$TRM_SOFTWARE
    • $ make install
    • $ make clean
  • 2nd, install colly (can be download from cpp-colly)

    • $ cd cpp-colly
    • $ autoreconf -f -i -s
    • $ ./configure --prefix=$TRM_SOFTWARE
    • $ make install
  • 3rd, install binary (can be download from cpp-binary)

    • $ cd cpp-binary
    • $ autoreconf -f -i -s
    • $ ./configure --prefix=$TRM_SOFTWARE
    • $ make install
    • $ make clean
  • 4th, install roche (can be download from cpp-roche)

    • $ cd cpp-roche
    • $ autoreconf -f -i -s
    • $ ./configure --prefix=$TRM_SOFTWARE
    • $ make install
    • $ make clean
  • 5th install pylcurve (Note: pylcurve needs a modified cpp-lcurve version. If you want to install cpp-lcurve without "python setup.py install", you should dowload it from https://github.com/lidihei/cpp-lcurve and install it by using "./pyinstall" )

    • $ cd pyclurve
    • $ python setup.py install

if you want to use the commands such as lroch, levmarq, lroches, you can write alias into the default configuration file (~/.bashrc or ~/.zshrc)

  • For example:
    • alias lroche="$TRM_SOFTWARE/bin/lcurve/lroche"

uninstall:

  • $ cd cpp-subs & make uninstall
  • $ cd cpp-colly & make uninstall
  • $ cd cpp-binary & make uninstall
  • $ cd cpp-roche & make uninstall
  • $ cd pylcurve/srcs/cpp-lcurve & make uninstall
  • $ pip unistall pylcurve

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