Fix pr 345

[amc-corey-cox]

This is a pr for testing to try to help fix #345. Please don't work on this PR, I'm just using it to run the full test suite to see if I can help fix the tests failing there and get this finished.

[codecov]

Codecov Report

Attention: Patch coverage is 82.22222% with 48 lines in your changes missing coverage. Please review.

Project coverage is 63.59%. Comparing base (f4a9311) to head (2a8a08d).
Report is 48 commits behind head on main.

Files with missing lines	Patch %	Lines
linkml_runtime/linkml_model/datasets.py	0.00%	15 Missing ⚠️
linkml_runtime/linkml_model/validation.py	0.00%	10 Missing ⚠️
linkml_runtime/utils/permissiblevalueimpl.py	0.00%	9 Missing ⚠️
linkml_runtime/loaders/context_flattener.py	0.00%	4 Missing ⚠️
linkml_runtime/utils/yamlutils.py	80.00%	3 Missing ⚠️
linkml_runtime/dumpers/rdf_dumper.py	0.00%	2 Missing ⚠️
linkml_runtime/utils/schemaview_cli.py	0.00%	2 Missing ⚠️
linkml_runtime/dumpers/json_dumper.py	80.00%	1 Missing ⚠️
linkml_runtime/linkml_model/mappings.py	0.00%	1 Missing ⚠️
linkml_runtime/loaders/loader_root.py	85.71%	1 Missing ⚠️

Additional details and impacted files

@@            Coverage Diff             @@
##             main     #373      +/-   ##
==========================================
+ Coverage   63.38%   63.59%   +0.20%     
==========================================
  Files          63       62       -1     
  Lines        8980     8916      -64     
  Branches     2572     2581       +9     
==========================================
- Hits         5692     5670      -22     
+ Misses       2669     2637      -32     
+ Partials      619      609      -10     

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