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Issues list

how to change color in degPlotCluster()
#67 by zhaodebiao5385 was closed Jan 13, 2025
2
scale parameter is missing in degPCA
#63 by bounlu was closed Jun 28, 2024
1
degPatterns crashes because of stack overloading
#62 by NastiaSkuba was closed May 7, 2024
9
Error in DEGpatterns: could not find function "set"
#60 by gowgowuk was closed Jun 28, 2024
11
How does degPatterns() decide what height to use for cutting tree
#59 by sang-15 was closed Jun 28, 2024
1
degCovariates does not shade by r value
#58 by hwick was closed Jun 28, 2024
5
issues with degPatterns not setting Time in Normalize
#57 by kesner was closed Jun 28, 2024
8
Boxplot position
#55 by Chunhuixu was closed Jun 28, 2024
1
lasso2 dependency no longer on CRAN
#53 by kennyworkman was closed Jun 28, 2024
5
Regarding Clustering Based on Expression Pattern
#52 by drives28 was closed Jun 28, 2024
1
Regarding Group # from degPatterns Output
#51 by drives28 was closed Jun 28, 2024
2
Validate the clusters from degPatterns
#49 by lgallegovillar was closed Jun 28, 2024
2
Sort each cluster graph numerically
#48 by bacas2 was closed Oct 31, 2021
1
Extracting Gene-Gene distance matrix from DegPatterns
#47 by chk63 was closed Jun 28, 2024
3
Extract One Cluster Plot from degPlotCluster
#46 by drives28 was closed Jun 28, 2024
3
Show Expression Changes from One Cluster
#45 by drives28 was closed Jun 28, 2024
5
z-scores of gene abudance
#44 by RubenRBakker was closed Jun 28, 2024
10
lasso2 is an R4 only package
#43 by alpapan was closed Mar 22, 2024
1
Plot shows only one coldata group on x-axis
#42 by elcega was closed Jun 28, 2024
3
Extract the genes of each group pattern
#41 by elcega was closed Jun 28, 2024
3
Error in install.packages : ERROR: failed to lock directory
#40 by venuraherath was closed Dec 5, 2020
1
Error in rep("one_group", nrow(metadata)) : invalid 'times' argument
#39 by elcega was closed Dec 18, 2020
8
Problem with summarise()
#37 by Bithorax was closed Jun 28, 2024
4
Wrong clusters identification
#34 by jgarces02 was closed Jun 15, 2020
2
How is variance explained calculated for degCovariates?
#31 by Zepeng-Mu was closed Apr 17, 2020
2
ProTip! What’s not been updated in a month: updated:<2025-02-28.