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move maly and clle to the right directory
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Max Leiserson committed Apr 14, 2019
1 parent c85f3aa commit f37d8a5
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions data/Snakefile
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Original file line number Diff line number Diff line change
Expand Up @@ -31,11 +31,11 @@ ICGC_R25_PACA_MUTATIONS = join(RAW_MUTATIONS_DIR, 'ICGC-PACA-AU-RELEASE_25.SBS.t
ICGC_R25_PACA_MUTATIONS_JSON = join(MUTATIONS_DIR, 'ICGC-PACA-AU-RELEASE_25.SBS.sigma.json')

ICGC_R27_MALY_MUTATIONS = join(RAW_MUTATIONS_DIR, 'ICGC-MALY-DE.RELEASE_27.SBS.tsv')
ICGC_R27_MALY_MUTATIONS_JSON = join(RAW_MUTATIONS_DIR, 'ICGC-MALY-DE-RELEASE_27.SBS.sigma.json')
ICGC_R27_MALY_MUTATIONS_JSON = join(MUTATIONS_DIR, 'ICGC-MALY-DE-RELEASE_27.SBS.sigma.json')

ICGC_R27_CLLE_MUTATIONS = join(RAW_MUTATIONS_DIR, 'ICGC-CLLE-ES.RELEASE_27.SBS.tsv')
ICGC_R27_CLLE_MUTATIONS_CLEAN = join(RAW_MUTATIONS_DIR, 'ICGC-CLLE-ES.RELEASE_27.SBS.clean.tsv')
ICGC_R27_CLLE_MUTATIONS_JSON = join(RAW_MUTATIONS_DIR, 'ICGC-CLLE-ES-RELEASE_27.SBS.sigma.json')
ICGC_R27_CLLE_MUTATIONS_JSON = join(MUTATIONS_DIR, 'ICGC-CLLE-ES-RELEASE_27.SBS.sigma.json')

HG19_BLACKLIST = join(RAW_MUTATIONS_DIR, 'hg19-blacklist.csv')

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