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refactor data step script into library (API) and consumer (CLI) #85

Merged
merged 24 commits into from
Sep 22, 2023
Merged

refactor data step script into library (API) and consumer (CLI) #85

merged 24 commits into from
Sep 22, 2023

Commits on Sep 22, 2023

  1. Nix flake: use Python 3.11

    @raehik
    raehik committed Sep 22, 2023
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  2. data step: refactor 

    Rewrite as a library (set of functions) and a CLI.
    @raehik
    raehik committed Sep 22, 2023
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  3. use new code paths in training step; fix MLproject 

    Cleaner subdomain configuration.
    @raehik
    raehik committed Sep 22, 2023
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  4. data: enable selecting Pangeo intake catalog 

    Also locks intake catalog to current HEAD.
    @raehik
    raehik committed Sep 22, 2023
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  5. MLproject: main->data, rename project

    @raehik
    raehik committed Sep 22, 2023
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  6. tweak MLproject, readme, data step CLI help

    @raehik
    raehik committed Sep 22, 2023
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  7. cli/data: re-add logging

    @raehik
    raehik committed Sep 22, 2023
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  8. cli/data: +log bounding operation

    @raehik
    raehik committed Sep 22, 2023
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  9. step/data: simplify gaussian_filter call 

    No need to repeat sigma according to docs.
    @raehik
    raehik committed Sep 22, 2023
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  10. cli/data: fix forcing compute call arg order

    @raehik
    raehik committed Sep 22, 2023
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  11. step/data: remove code copied from unused debug 

    Also does more operations up front in the CLI for testing purposes.
    @raehik
    raehik committed Sep 22, 2023
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  12. step/data: fix coarsening scale args

    @raehik
    raehik committed Sep 22, 2023
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  13. step/data/coarsen: cleaning

    @raehik
    raehik committed Sep 22, 2023
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  14. step/data: simplify ufunc call

    @raehik
    raehik committed Sep 22, 2023
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  15. readme: clarify data step CLI

    @raehik
    raehik committed Sep 22, 2023
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  16. step/data: clean up, log more

    @raehik
    raehik committed Sep 22, 2023
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  17. bounding box: add validate function

    @raehik
    raehik committed Sep 22, 2023
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  18. step/data: clean up some to-dos

    @raehik
    raehik committed Sep 22, 2023
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  19. fix data step pytests

    @raehik
    raehik committed Sep 22, 2023
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  20. MLproject: remove data step

    @raehik
    raehik committed Sep 22, 2023
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  21. readme: fix example commands

    @raehik
    raehik committed Sep 22, 2023
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  22. readme: +note on --help for data step CLI

    @raehik
    raehik committed Sep 22, 2023
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  23. cli/data: fix bound_dataset call

    @raehik
    raehik committed Sep 22, 2023
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  24. readme: +note on old GEOS req

    @raehik
    raehik committed Sep 22, 2023
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