adding 1000 samples to data

markolalovic · Jul 9, 2024 · dfdc6c4 · dfdc6c4
1 parent eb7763e
commit dfdc6c4
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Showing 30 changed files with 80 additions and 75 deletions.
diff --git a/data/X_1000.npy b/data/X_1000.npy
diff --git a/data/y_1000.npy b/data/y_1000.npy
diff --git a/src/appendImages.js → demo/appendImages.js b/src/appendImages.js → demo/appendImages.js
diff --git a/src/bettiBarcodes.js → demo/bettiBarcodes.js b/src/bettiBarcodes.js → demo/bettiBarcodes.js
diff --git a/src/digitGraph.js → demo/digitGraph.js b/src/digitGraph.js → demo/digitGraph.js
diff --git a/data/digitGraphData.json → demo/digitGraphData.json b/data/digitGraphData.json → demo/digitGraphData.json
diff --git a/demo/fix-isssues.html b/demo/fix-isssues.html
@@ -0,0 +1,36 @@
+<!DOCTYPE html>
+<html lang="en">
+  <head>
+    <meta charset="UTF-8" />
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" />
+    <title>tda-digits-example</title>
+    <script src="https://d3js.org/d3.v7.min.js"></script>
+  </head>
+  <body>
+    <div id="chart-window"></div>
+    <div id="slider">
+      <p class="text">
+        <strong>Select threshold value:</strong>
+      </p>
+      <input
+        type="range"
+        step="1"
+        min="0"
+        max="22"
+        value="0"
+        id="range-input"
+      />
+    </div>
+    <div class="alignright">
+      Read more about this in:
+      <a href="https://lalovic.io/blog/tda-digits/">blog post</a>
+    </div>
+    <script src="./digitGraphData.json"></script>
+    <script src="./layoutRect.js"></script>
+    <script src="./appendImages.js"></script>
+    <script src="./digitGraph.js"></script>
+    <script src="./bettiBarcodes.js"></script>
+    <script src="./functions.js"></script>
+    <script src="./main.js"></script>
+  </body>
+</html>
diff --git a/src/functions.js → demo/functions.js b/src/functions.js → demo/functions.js
diff --git a/images/A.png → demo/images/A.png b/images/A.png → demo/images/A.png
diff --git a/images/B.png → demo/images/B.png b/images/B.png → demo/images/B.png
diff --git a/images/C.png → demo/images/C.png b/images/C.png → demo/images/C.png
diff --git a/images/beta_0.png → demo/images/beta_0.png b/images/beta_0.png → demo/images/beta_0.png
diff --git a/images/beta_1.png → demo/images/beta_1.png b/images/beta_1.png → demo/images/beta_1.png
diff --git a/images/handwritten-digit.png → demo/images/handwritten-digit.png b/images/handwritten-digit.png → demo/images/handwritten-digit.png
diff --git a/images/y.png → demo/images/y.png b/images/y.png → demo/images/y.png
diff --git a/demo/index.html b/demo/index.html
@@ -0,0 +1,38 @@
+<!DOCTYPE html>
+<html lang="en">
+  <head>
+    <meta charset="UTF-8" />
+    <meta name="description" content="Example of extracting topological features"/>
+    <meta name="viewport" content="width=device-width, initial-scale=1.0" />
+    <title>tda-digits-example</title>
+    <link rel="stylesheet" href="style.css">
+    <script src="https://d3js.org/d3.v7.min.js"></script>
+  </head>
+  <body>
+    <div id="chart-window"></div>
+    <div id="slider">
+      <p class="text">
+        <strong>Select threshold value:</strong>
+      </p>
+      <input
+        type="range"
+        step="1"
+        min="0"
+        max="22"
+        value="0"
+        id="range-input"
+      />
+    </div>
+    <div class="alignright">
+      Read more about this demo in:  
+      <a href="https://lalovic.io/blog/tda-digits/">blog post</a>
+    </div>
+    <script src="./digitGraphData.json"></script>
+    <script src="./layoutRect.js"></script>
+    <script src="./appendImages.js"></script>
+    <script src="./digitGraph.js"></script>
+    <script src="./bettiBarcodes.js"></script>
+    <script src="./functions.js"></script>
+    <script src="./main.js"></script>
+  </body>
+</html>
diff --git a/src/layoutRect.js → demo/layoutRect.js b/src/layoutRect.js → demo/layoutRect.js
diff --git a/src/main.js → demo/main.js b/src/main.js → demo/main.js
diff --git a/style.css → demo/style.css b/style.css → demo/style.css
@@ -1,7 +1,6 @@
 body {
   margin-top: 30px;
-  text-align:center;
-  font-family: "Computer Modern Sans", sans-serif;
+  text-align: center;
   font-size: 20px;
 }
 
@@ -30,8 +29,3 @@ input {
     font-size: 24px;
     padding: 0px 17px 0px 7px;
 }
-
-.padding2 {
-    font-size: 24px;
-    padding: 0px 17px 0px 7px;
-}
diff --git a/favicon.ico b/favicon.ico
diff --git a/figures/animation/anim-compressed.gif b/figures/animation/anim-compressed.gif
diff --git a/figures/animation/clean-files.sh b/figures/animation/clean-files.sh
diff --git a/figures/animation/compress-gif.sh b/figures/animation/compress-gif.sh
diff --git a/figures/animation/convert-svg-to-png.sh b/figures/animation/convert-svg-to-png.sh
diff --git a/figures/animation/crop_all.sh b/figures/animation/crop_all.sh
diff --git a/figures/animation/optimize-gif.sh b/figures/animation/optimize-gif.sh
diff --git a/figures/animation/pngs-to-gif.sh b/figures/animation/pngs-to-gif.sh
diff --git a/index.html b/index.html
diff --git a/scripts/prepare_data.py b/scripts/prepare_data.py
@@ -7,7 +7,9 @@
 from sklearn.datasets import fetch_openml
 import sys
 
-n_samples = 10000
+# better use: n_samples = 10000 
+n_samples = 1000
+
 if len(sys.argv) == 2:
     print('Setting n_samples to: %i' % (n_samples))
     n_samples = int(sys.argv[1])

diff --git a/src/tda_digits.py b/src/tda_digits.py
@@ -19,7 +19,8 @@
 
 from drawing_module import *
 
-n_samples = 10000 # number of loaded MNIST handwritten digits
+# better use: n_samples = 10000 
+n_samples = 1000 # number of loaded MNIST handwritten digits
 if len(sys.argv) == 2:
     print('Setting n_samples to: %i' % (n_samples))
     n_samples = int(sys.argv[1])