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Issues: marschall-lab/strand-seq-graph-phasing

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10 Open 33 Closed
10 Open 33 Closed
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Issues list

Error in rule count_haplotype_markers
#54 opened Sep 24, 2024 by nidhi12k
@mir-cat
1
Identify "true" misorientations by comparing edges to and from nodes with their Strand-seq inferred orientation
#51 opened Apr 15, 2024 by mir-cat
@mir-cat
Convert short R scripts to inline code?
#50 opened Apr 4, 2024 by mir-cat
What parameters to expose in config file?
#49 opened Apr 4, 2024 by mir-cat
Add rukki correctness plots by cluster as well as chromosome
#46 opened Apr 2, 2024 by mir-cat
Add evaluation of gaps and gap size to evaluation plots
#45 opened Feb 22, 2024 by mir-cat
v0.3.1-alpha: building of Renv not specified
#41 opened Dec 20, 2023 by ptrebert
v0.3.1-alpha: something wrong with conda envs
#39 opened Dec 20, 2023 by ptrebert
1
Refactor rule inputs to use rules.[rule name].output.[output name] format
#37 opened Nov 27, 2023 by mir-cat
@mir-cat
Improve phasing information transfer from pipeline to hifiasm
#35 opened Nov 14, 2023 by mir-cat
@mir-cat
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