Name	Name	Last commit message	Last commit date
Latest commit History 197 Commits
Extended Kalman filter	Extended Kalman filter
figures	figures
functions	functions
post-submission	post-submission
precomputed Brownian bridges likelihood	precomputed Brownian bridges likelihood
.gitignore	.gitignore
Brownian bridge likelihood figure.R	Brownian bridge likelihood figure.R
Brownian bridge likelihood time test.R	Brownian bridge likelihood time test.R
Brownian bridge varying thin estimates.R	Brownian bridge varying thin estimates.R
Hessian_approximation.R	Hessian_approximation.R
IGNORE_MALA likelihood.R	IGNORE_MALA likelihood.R
IGNORE_extended Kalman filter increased state space.R	IGNORE_extended Kalman filter increased state space.R
IGNORE_matern experiment.R	IGNORE_matern experiment.R
IGNORE_particle filter likelihood.R	IGNORE_particle filter likelihood.R
IGNORE_telemetry_inla.R	IGNORE_telemetry_inla.R
IGNORE_underdamped_estimation_optim.R	IGNORE_underdamped_estimation_optim.R
Langevin observation error.R	Langevin observation error.R
Langevin track plot.R	Langevin track plot.R
Langevin_kalman_linear_predictor.R	Langevin_kalman_linear_predictor.R
Martin_MSc_relaunch.Rproj	Martin_MSc_relaunch.Rproj
README.md	README.md
Rplots.pdf	Rplots.pdf
compute_lik_grad_full.cpp	compute_lik_grad_full.cpp
covariate plot.R	covariate plot.R
data.Rda	data.Rda
debug.R	debug.R
estimator variance figure.R	estimator variance figure.R
figure 1 code.R	figure 1 code.R
figure 2&3 code-laptop.R	figure 2&3 code-laptop.R
figure 2&3 code.R	figure 2&3 code.R
fixed nobs simulations.R	fixed nobs simulations.R
function covariate Langevin Kalman filter.R	function covariate Langevin Kalman filter.R
joint model MCMC-laptop.R	joint model MCMC-laptop.R
joint model MCMC.R	joint model MCMC.R
kalman_filter_overdamped_langevin.R	kalman_filter_overdamped_langevin.R
langevin_2_covariate.R	langevin_2_covariate.R
mala edit.R	mala edit.R
monte carlo likelihood.R	monte carlo likelihood.R
monte carlo path figure.R	monte carlo path figure.R
plot.png	plot.png
point_process_MCMC.R	point_process_MCMC.R
point_process_example.R	point_process_example.R
post_submission_simulations.R	post_submission_simulations.R
precomputed Brownian bridge varying dt estimates.R	precomputed Brownian bridge varying dt estimates.R
precomputed bb.R	precomputed bb.R
scenario2.R	scenario2.R
sea_lion_deltamax_studyM=100.Rda	sea_lion_deltamax_studyM=100.Rda
sea_lion_deltamax_studyM=25.Rda	sea_lion_deltamax_studyM=25.Rda
sea_lion_deltamax_studyM=50.Rda	sea_lion_deltamax_studyM=50.Rda
simulation_MALA.R	simulation_MALA.R
stochastic likelihood and gradient.R	stochastic likelihood and gradient.R
time_plots.R	time_plots.R
underdamped_estimation.R	underdamped_estimation.R
varying M Brownian bridge estimates.R	varying M Brownian bridge estimates.R
varying M estimates stochastic likelihood.R	varying M estimates stochastic likelihood.R
varying N estimates stochastic likelihood.R	varying N estimates stochastic likelihood.R
varying thin EM estimates boxplot.R	varying thin EM estimates boxplot.R
varying thin estimates stochastic likelihood.R	varying thin estimates stochastic likelihood.R
varying_M_estimates.Rda	varying_M_estimates.Rda
varying_M_estimates_stochastic likelihood fix.Rda	varying_M_estimates_stochastic likelihood fix.Rda
varying_M_estimates_stochastic likelihood.Rda	varying_M_estimates_stochastic likelihood.Rda
varying_N_estimates.Rda	varying_N_estimates.Rda
varying_N_estimates_stochastic_likelihood.Rda	varying_N_estimates_stochastic_likelihood.Rda
varying_N_estimates_stochastic_likelihood_params.Rda	varying_N_estimates_stochastic_likelihood_params.Rda
varying_thin_estimates.Rda	varying_thin_estimates.Rda
varying_thin_estimates_EM.Rda	varying_thin_estimates_EM.Rda
varying_thin_estimates_fixed_Tmax.Rda	varying_thin_estimates_fixed_Tmax.Rda
varying_thin_estimates_stochastic_likelihood.Rda	varying_thin_estimates_stochastic_likelihood.Rda

Name

Last commit message

Last commit date

197 Commits

Extended Kalman filter

figures

functions

post-submission

precomputed Brownian bridges likelihood

.gitignore

Brownian bridge likelihood figure.R

Brownian bridge likelihood time test.R