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75 changes: 0 additions & 75 deletions
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src/main/java/org/mastodon/mamut/tomancak/export/spotcounts/ui/ExportSpotCountsView.java
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75 changes: 75 additions & 0 deletions
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...test/java/org/mastodon/mamut/tomancak/export/ExportSpotCountsPerTimepointCommandTest.java
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| /*- | ||
| * #%L | ||
| * mastodon-tomancak | ||
| * %% | ||
| * Copyright (C) 2018 - 2024 Tobias Pietzsch | ||
| * %% | ||
| * Redistribution and use in source and binary forms, with or without | ||
| * modification, are permitted provided that the following conditions are met: | ||
| * | ||
| * 1. Redistributions of source code must retain the above copyright notice, | ||
| * this list of conditions and the following disclaimer. | ||
| * 2. Redistributions in binary form must reproduce the above copyright notice, | ||
| * this list of conditions and the following disclaimer in the documentation | ||
| * and/or other materials provided with the distribution. | ||
| * | ||
| * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" | ||
| * AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE | ||
| * IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE | ||
| * ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE | ||
| * LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR | ||
| * CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF | ||
| * SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS | ||
| * INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN | ||
| * CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) | ||
| * ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE | ||
| * POSSIBILITY OF SUCH DAMAGE. | ||
| * #L% | ||
| */ | ||
| package org.mastodon.mamut.tomancak.export; | ||
|
|
||
| import org.apache.commons.io.FileUtils; | ||
| import org.junit.Test; | ||
| import org.mastodon.mamut.feature.branch.exampleGraph.ExampleGraph2; | ||
| import org.mastodon.mamut.model.Model; | ||
| import org.mastodon.mamut.tomancak.export.ExportSpotCountsPerTimepointCommand; | ||
| import org.scijava.Context; | ||
| import org.scijava.app.StatusService; | ||
|
|
||
| import java.io.File; | ||
| import java.io.IOException; | ||
|
|
||
| import static org.junit.Assert.assertEquals; | ||
|
|
||
| /** | ||
| * Tests {@link ExportSpotCountsPerTimepointCommand} | ||
| */ | ||
| public class ExportSpotCountsPerTimepointCommandTest | ||
| { | ||
|
|
||
| @Test | ||
| public void testWriteSpotCountsToFile() throws IOException | ||
| { | ||
| try (Context context = new Context()) | ||
| { | ||
| Model model = new ExampleGraph2().getModel(); | ||
| File outputFile = File.createTempFile( "spotcounts", ".csv" ); | ||
| outputFile.deleteOnExit(); | ||
| StatusService service = context.service( StatusService.class ); | ||
|
|
||
| ExportSpotCountsPerTimepointCommand.writeSpotCountsToFile( model, outputFile, service ); | ||
|
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| String content = FileUtils.readFileToString( outputFile ); | ||
| String expected = "\"timepoint\",\"spots\"\n" | ||
| + "0,1\n" | ||
| + "1,1\n" | ||
| + "2,1\n" | ||
| + "3,2\n" | ||
| + "4,1\n" | ||
| + "5,3\n" | ||
| + "6,1\n" | ||
| + "7,2\n"; | ||
| assertEquals( expected, content ); | ||
| } | ||
| } | ||
| } |
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