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More metadata fixups. #78

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Merged
MBARIMike merged 2 commits into from
Dec 2, 2025
Merged

More metadata fixups. #78

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7ffbcbf
Fixup summary metadata.
MBARIMike Dec 2, 2025
ea58fee
Add log message to output actual_hostname.
MBARIMike Dec 2, 2025
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4 changes: 2 additions & 2 deletions .vscode/launch.json
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Original file line number Diff line number Diff line change
Expand Up @@ -360,8 +360,8 @@
// Fails with ValueError: different number of dimensions on data and dims: 2 vs 1 for wetlabsubat_digitized_raw_ad_counts variable
//"args": ["-v", "1", "--log_file", "pontus/missionlogs/2025/20250604_20250616/20250608T020852/202506080209_202506081934.nc4", "--no_cleanup"]
// Full month of June 2025 for Pontus with WetLabsUBAT Group data
//"args": ["-v", "1", "--auv_name", "pontus", "--start", "20250601T000000", "--end", "20250702T000000", "--noinput", "--num_cores", "1", "--no_cleanup"]
"args": ["-v", "1", "--auv_name", "pontus", "--start", "20250601T000000", "--end", "20250702T000000", "--noinput", "--num_cores", "1", "--no_cleanup", "--clobber"]
"args": ["-v", "1", "--auv_name", "pontus", "--start", "20250601T000000", "--end", "20250702T000000", "--noinput", "--num_cores", "1", "--no_cleanup"]
//"args": ["-v", "1", "--auv_name", "pontus", "--start", "20250601T000000", "--end", "20250702T000000", "--noinput", "--num_cores", "1", "--no_cleanup", "--clobber"]
},

]
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8 changes: 8 additions & 0 deletions src/data/process.py
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Expand Up @@ -1014,6 +1014,14 @@ def process_log_file(self, log_file: str) -> None:
)
self.logger.addHandler(self.log_handler)
self.logger.info("commandline = %s", self.commandline)
# Try to get actual host name, fall back to container name
actual_hostname = os.getenv("HOST_NAME", gethostname())
self.logger.info(
"Processing log_file %s by user %s on host %s",
log_file,
getuser(),
actual_hostname,
)

netcdfs_dir = self.extract(log_file)
self.combine(log_file=log_file)
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2 changes: 1 addition & 1 deletion src/data/resample.py
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Expand Up @@ -333,7 +333,7 @@ def lrauv_global_metadata(self) -> dict:
f"point median filter."
)
self.metadata["summary"] += (
f". Processing log file: {BASE_LRAUV_WEB}/"
f" Processing log file: {BASE_LRAUV_WEB}"
f"{self.log_file.replace('.nc4', '_processing.log')}"
)
# Remove mention of original sampling intervals from summary
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