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Trap EOFError for "No universals_time variable in combined_nc". #80

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Merged
MBARIMike merged 1 commit into from
Dec 2, 2025
Merged

Trap EOFError for "No universals_time variable in combined_nc". #80

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3 changes: 2 additions & 1 deletion .vscode/launch.json
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Original file line number Diff line number Diff line change
Expand Up @@ -360,8 +360,9 @@
// Fails with ValueError: different number of dimensions on data and dims: 2 vs 1 for wetlabsubat_digitized_raw_ad_counts variable
//"args": ["-v", "1", "--log_file", "pontus/missionlogs/2025/20250604_20250616/20250608T020852/202506080209_202506081934.nc4", "--no_cleanup"]
// Full month of June 2025 for Pontus with WetLabsUBAT Group data
"args": ["-v", "1", "--auv_name", "pontus", "--start", "20250601T000000", "--end", "20250702T000000", "--noinput", "--num_cores", "1", "--no_cleanup"]
//"args": ["-v", "1", "--auv_name", "pontus", "--start", "20250601T000000", "--end", "20250702T000000", "--noinput", "--num_cores", "1", "--no_cleanup"]
//"args": ["-v", "1", "--auv_name", "pontus", "--start", "20250601T000000", "--end", "20250702T000000", "--noinput", "--num_cores", "1", "--no_cleanup", "--clobber"]
"args": ["-v", "1", "--log_file", "pontus/missionlogs/2025/20250623_20250707/20250707T043011/slate.nc4", "--no_cleanup"]
},

]
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2 changes: 1 addition & 1 deletion src/data/process.py
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Expand Up @@ -104,7 +104,7 @@ def wrapper(self, log_file: str):
t_start = time.time()
try:
return func(self, log_file)
except (TestMission, FailedMission) as e:
except (TestMission, FailedMission, EOFError) as e:
self.logger.info(str(e))
finally:
if hasattr(self, "log_handler"):
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