fix prefix

med2rdf · Jun 27, 2024 · 2a09e32 · 2a09e32
1 parent 63d43b9
commit 2a09e32
Show file tree

Hide file tree

Showing 4 changed files with 5 additions and 7 deletions.
diff --git a/Cargo.lock b/Cargo.lock
diff --git a/Cargo.toml b/Cargo.toml
@@ -1,6 +1,6 @@
 [package]
 name = "mgend-rdf"
-version = "1.0.2"
+version = "1.0.3"
 edition = "2021"
 
 [dependencies]

diff --git a/src/models/name_space.rs b/src/models/name_space.rs
@@ -19,8 +19,8 @@ macro_rules! ns {
 ns!(FALDO, "faldo", "http://biohackathon.org/resource/faldo#");
 ns!(FOAF, "foaf", "http://xmlns.com/foaf/0.1/");
 ns!(GVO, "gvo", "http://genome-variation.org/");
-ns!(HCO, "hco", "http://identifiers.org/hco/");
-ns!(HGNC, "hgnc", "http://identifiers.org/hgnc/");
+ns!(HCO, "hco", "http://identifiers.org/hco:");
+ns!(HGNC, "hgnc", "http://identifiers.org/hgnc:");
 ns!(OBO, "obo", "http://purl.obolibrary.org/obo/");
 ns!(OLO, "olo", "http://purl.org/ontology/olo/core#");
 ns!(ORG, "org", "https://www.w3.org/ns/org#");

diff --git a/src/models/output/gene.rs b/src/models/output/gene.rs
@@ -39,9 +39,7 @@ impl Gene {
             id: symbol.as_ref().to_string(),
             typ: format!("{}:Gene", MED2RDF.prefix),
             label: symbol.as_ref().to_string(),
-            xref: Gene::hgnc(hgnc)
-                .find(symbol)
-                .map(|x| format!("{}:{}", HGNC.prefix, x)),
+            xref: Gene::hgnc(hgnc).find(symbol).map(|x| x.to_owned()),
         }
     }
 }