[pull] develop from dermatologist:develop#56
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pull[bot] merged 12 commits intomederrata:developfrom Dec 24, 2025
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…#253) * Initial plan * Fix llm_query.py and improve examples with comprehensive documentation Co-authored-by: dermatologist <6259644+dermatologist@users.noreply.github.com> * Add .gitignore for sqlite files, improve llm_engine.py comments, add README_LLM.md Co-authored-by: dermatologist <6259644+dermatologist@users.noreply.github.com> * Switch to llama-index HuggingFace embeddings, support both string and instance params Co-authored-by: dermatologist <6259644+dermatologist@users.noreply.github.com> * Add comprehensive CHANGES_SUMMARY.md documenting all improvements Co-authored-by: dermatologist <6259644+dermatologist@users.noreply.github.com> * Update example documentation and database references to use 'cdm.sqlite' * Add .env to .gitignore to exclude environment variable files * Refactor code structure for improved readability and maintainability * Update README to reflect switch from langchain to llama-index for LLM-based queries * Refactor code structure for improved readability and maintainability * Remove redundant main function definition and streamline execution flow in LLM example * Comment out SQL execution verification code in LLM example for clarity * Update LLM example documentation for clarity and consistency * Enhance LLM example documentation and remove obsolete file; update query engine configuration for improved clarity and functionality * Update LLM example usage note to indicate deprecation of create_sql_agent support and introduce MCP server implementation * Update LLM example documentation to recommend MCP server and adjust LLM initialization for improved functionality * Enhance LLM example documentation and update query engine to recommend MCP server; add dynamic prompt tool for improved query generation * Refactor LLM initialization to use OpenAI model; update dependencies and improve dynamic prompt documentation * Update LLM example and query utilities: increase API call delay, rename dynamic prompt tool, and improve error handling * Refactor code structure for improved readability and maintainability * refactor: Replace custom test mocks with `unittest.mock` and configure `nest_asyncio` for async test compatibility. * refactor: Update LLM example model and enhance query tool documentation; remove unnecessary rate limit delays * docs: Update README to reference new LLM example notebook and script --------- Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com> Co-authored-by: dermatologist <6259644+dermatologist@users.noreply.github.com> Co-authored-by: Bell Eapen <github@gulfdoctor.net> Co-authored-by: Bell Eapen <github_public@gulfdoctor.net>
* refactor: reorganize imports and improve engine initialization in README and engine_factory * fix: enhance SQLite engine configuration and improve test cleanup * Update tests/test_d_vector.py Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com> * Update tests/test_d_vector.py Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com> * Update t_install.py Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com> * refactor: remove unused pytest import from test files --------- Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>
…omit user/password inputs for PyPI
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