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Quick Install

To use it:

pip install macapype

To develop:

git clone https://github.com/Macatools/macapype.git
cd macapype
python setup.py develop

Docker image

docker pull macatools/macapype/latest

Documentation

https://macatools.github.io/macapype/

Related to project:

A guide for PNH MRI processing, and in particular, the session on structural MRI processing

Open Science Room OSR 2020 of OHBM congress presentation of macapype

Forum macapype_users

The macapype_users can be be found here (requires a framateam/framagit account, but should be accessible with a github or bitbucket account)

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PNH segmentation pipelines based on nipype

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  • Python 60.3%
  • Shell 24.9%
  • MATLAB 13.3%
  • Dockerfile 1.5%