Updated requirements to resolve security warnings.

requirements.txt

@@ -1,135 +1,126 @@
 #
-# This file is autogenerated by pip-compile with Python 3.8
+# This file is autogenerated by pip-compile with Python 3.10
 # by the following command:
 #
 #    pip-compile requirements.in
 #
-aiofiles==23.1.0
+aiofiles==23.2.1
     # via -r requirements.in
-aiohttp==3.8.5
+aiohttp==3.9.3
     # via -r requirements.in
 aiopg==1.4.0
     # via databases
 aiosignal==1.3.1
     # via aiohttp
-alabaster==0.7.13
+alabaster==0.7.16
     # via sphinx
-alembic==1.11.1
+alembic==1.13.1
     # via -r requirements.in
-anyio==3.7.0
+anyio==4.2.0
     # via starlette
 asgiref==3.7.2
     # via uvicorn
-async-timeout==4.0.2
+async-timeout==4.0.3
     # via
     #   aiohttp
     #   aiopg
-asyncpg==0.27.0
+    #   asyncpg
+asyncpg==0.29.0
     # via -r requirements.in
-attrs==23.1.0
+attrs==23.2.0
     # via aiohttp
-babel==2.12.1
+babel==2.14.0
     # via sphinx
-boto3==1.26.159
+boto3==1.34.40
     # via -r requirements.in
-botocore==1.29.159
+botocore==1.34.40
     # via
     #   boto3
     #   s3transfer
-certifi==2023.7.22
+certifi==2024.2.2
     # via
     #   -r requirements.in
     #   requests
-charset-normalizer==3.1.0
-    # via
-    #   aiohttp
-    #   requests
-click==8.1.3
+charset-normalizer==3.3.2
+    # via requests
+click==8.1.7
     # via uvicorn
-daiquiri==3.2.1
+daiquiri==3.2.5.1
     # via -r requirements.in
-databases[aiopg]==0.7.0
+databases[aiopg]==0.8.0
     # via -r requirements.in
 dicomweb-client==0.59.1
     # via -r requirements.in
-distro==1.8.0
+distro==1.9.0
     # via -r requirements.in
-docker==6.1.3
+docker==7.0.0
     # via -r requirements.in
 docutils==0.18.1
     # via
     #   sphinx
     #   sphinx-rtd-theme
-exceptiongroup==1.1.1
+exceptiongroup==1.2.0
     # via
     #   anyio
     #   pytest
-freezegun==1.2.2
+freezegun==1.4.0
     # via -r requirements.in
-frozenlist==1.3.3
+frozenlist==1.4.1
     # via
     #   aiohttp
     #   aiosignal
 future==0.18.3
-    # via
-    #   -r requirements.in
-    #   pyxnat
+    # via -r requirements.in
 graphyte==1.7.1
     # via -r requirements.in
-greenlet==2.0.2
+greenlet==3.0.3
     # via sqlalchemy
 h11==0.14.0
     # via uvicorn
-hupper==1.12
+hupper==1.12.1
     # via -r requirements.in
-idna==3.4
+idna==3.6
     # via
     #   anyio
     #   requests
     #   yarl
 imagesize==1.4.1
     # via sphinx
-importlib-metadata==6.7.0
-    # via
-    #   alembic
-    #   sphinx
-importlib-resources==5.12.0
-    # via alembic
 iniconfig==2.0.0
     # via pytest
 itsdangerous==2.1.2
     # via -r requirements.in
-jinja2==3.1.2
+jinja2==3.1.3
     # via
     #   -r requirements.in
     #   sphinx
 jmespath==1.0.1
     # via
     #   boto3
     #   botocore
-lxml==4.9.3
+lxml==5.1.0
     # via
     #   -r requirements.in
     #   pyxnat
-mako==1.2.4
+mako==1.3.2
     # via
     #   -r requirements.in
     #   alembic
-markupsafe==2.1.3
+markupsafe==2.1.5
     # via
     #   jinja2
     #   mako
-multidict==6.0.4
+multidict==6.0.5
     # via
     #   aiohttp
     #   yarl
-mypy==1.4.0
+mypy==1.8.0
     # via -r requirements.in
 mypy-extensions==1.0.0
     # via mypy
-numpy==1.24.3
+numpy==1.26.4
     # via dicomweb-client
-packaging==23.1
+packaging==23.2
     # via
     #   docker
     #   pytest
@@ -138,32 +129,32 @@ passlib==1.7.4
     # via -r requirements.in
 pathlib==1.0.1
     # via pyxnat
-pillow==10.1.0
+pillow==10.2.0
     # via
     #   -r requirements.in
     #   dicomweb-client
-pluggy==1.2.0
+pluggy==1.4.0
     # via pytest
-psycopg2==2.9.6
+psycopg2==2.9.9
     # via -r requirements.in
-psycopg2-binary==2.9.6
+psycopg2-binary==2.9.9
     # via aiopg
-pydantic==1.10.9
+pydantic==1.10.14
     # via -r requirements.in
-pydicom==2.4.1
+pydicom==2.4.4
     # via
     #   -r requirements.in
     #   dicomweb-client
 pyfakefs==4.5.6
     # via -r requirements.in
-pygments==2.15.1
+pygments==2.17.2
     # via sphinx
-pytest==7.3.2
+pytest==8.0.0
     # via
     #   -r requirements.in
     #   pytest-mock
     #   pytest-subprocess
-pytest-mock==3.11.1
+pytest-mock==3.12.0
     # via -r requirements.in
 pytest-subprocess==1.5.0
     # via -r requirements.in
@@ -173,13 +164,11 @@ python-dateutil==2.8.2
     #   freezegun
 python-json-logger==2.0.7
     # via daiquiri
-python-multipart==0.0.6
+python-multipart==0.0.9
     # via -r requirements.in
 python-nomad==2.0.0
     # via -r requirements.in
-pytz==2023.3
-    # via babel
-pyxnat==1.4
+pyxnat==1.6.2
     # via -r requirements.in
 requests==2.31.0
     # via
@@ -190,12 +179,11 @@ requests==2.31.0
     #   sphinx
 retrying==1.3.4
     # via dicomweb-client
-s3transfer==0.6.1
+s3transfer==0.10.0
     # via boto3
 six==1.16.0
     # via
     #   python-dateutil
-    #   pyxnat
     #   retrying
 sniffio==1.3.0
     # via anyio
@@ -206,28 +194,28 @@ sphinx==5.0.0
     #   -r requirements.in
     #   sphinx-rtd-theme
     #   sphinxcontrib-jquery
-sphinx-rtd-theme==1.2.2
+sphinx-rtd-theme==2.0.0
     # via -r requirements.in
-sphinxcontrib-applehelp==1.0.4
+sphinxcontrib-applehelp==1.0.8
     # via sphinx
-sphinxcontrib-devhelp==1.0.2
+sphinxcontrib-devhelp==1.0.6
     # via sphinx
-sphinxcontrib-htmlhelp==2.0.1
+sphinxcontrib-htmlhelp==2.0.5
     # via sphinx
 sphinxcontrib-jquery==4.1
     # via sphinx-rtd-theme
 sphinxcontrib-jsmath==1.0.1
     # via sphinx
-sphinxcontrib-qthelp==1.0.3
+sphinxcontrib-qthelp==1.0.7
     # via sphinx
-sphinxcontrib-serializinghtml==1.1.5
+sphinxcontrib-serializinghtml==1.1.10
     # via sphinx
-sqlalchemy==1.4.48
+sqlalchemy==1.4.51
     # via
     #   -r requirements.in
     #   alembic
     #   databases
-starlette==0.28.0
+starlette==0.37.1
     # via
     #   -r requirements.in
     #   starlette-auth-toolkit
@@ -244,35 +232,28 @@ types-jinja2==2.11.9
     # via -r requirements.in
 types-markupsafe==1.1.10
     # via types-jinja2
-types-requests==2.31.0.1
+types-requests==2.31.0.20240125
     # via -r requirements.in
-types-urllib3==1.26.25.13
-    # via types-requests
-typing-extensions==4.6.3
+typing-extensions==4.9.0
     # via
     #   -r requirements.in
     #   alembic
+    #   anyio
     #   asgiref
     #   mypy
     #   pydantic
-    #   starlette
-urllib3==1.26.18
+urllib3==2.0.7
     # via
     #   -r requirements.in
     #   botocore
     #   docker
     #   requests
+    #   types-requests
 uvicorn==0.16.0
     # via -r requirements.in
-watchdog==3.0.0
+watchdog==4.0.0
     # via -r requirements.in
-websocket-client==1.6.0
-    # via docker
-wheel==0.40.0
+wheel==0.42.0
     # via -r requirements.in
-yarl==1.9.2
+yarl==1.9.4
     # via aiohttp
-zipp==3.15.0
-    # via
-    #   importlib-metadata
-    #   importlib-resources