MGHammell Laboratory
The Gale Hammell Lab uses algorithms to integrate high throughput sequencing data to model regulatory re-wiring events in human diseases.
- 18 followers
- United States of America
- http://mghlab.org
- mghcompbio@gmail.com
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Showing 10 of 11 repositories
- TElocal Public
A package for quantifying transposable elements at a locus level for RNAseq datasets.
mhammell-laboratory/TElocal’s past year of commit activity - TEsingle Public
A package to quantify genes & transposable elements transcripts from single cell/nuclei RNAseq datasets
mhammell-laboratory/TEsingle’s past year of commit activity - TEsingle_benchmarking_scripts Public
Scripts used for benchmarking TE quantification of simulated single cell/nuclei reads
mhammell-laboratory/TEsingle_benchmarking_scripts’s past year of commit activity - TEsingle_Martirosyan_analysis_code Public
Code used to analyze Martirosyan et al. dataset with TEsingle
mhammell-laboratory/TEsingle_Martirosyan_analysis_code’s past year of commit activity - TEtranscripts Public
A package for including transposable elements in differential enrichment analysis of sequencing datasets.
mhammell-laboratory/TEtranscripts’s past year of commit activity - CellRangerTE Public
Script to create a Cell Ranger reference database that can quantify transposable elements.
mhammell-laboratory/CellRangerTE’s past year of commit activity
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