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Merge pull request #7 from thrkll/fix-readme-datasets-section
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Fixed repetition in Datasets section of README
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yangkky authored Oct 10, 2023
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Expand Up @@ -73,8 +73,7 @@ The Multiple Sequence Alignments (MSAs) are from the [OpenFold dataset](https://
which contains 401,381 MSAs for 140,000 unique Protein Data Bank (PDB) chains and 16,000,000 UniClust30 clusters.
The intrinsically disordered regions (IDR) data was obtained from the [Reverse Homology GitHub](https://github.com/alexxijielu/reverse_homology/).

For the scaffolding structural motifs task, we use the baselines compiled in RFDiffusion. We provide pdb and fasta files used for conditionally generating sequences in the [examples/scaffolding-pdbs](https://github.com/microsoft/evodiff/tree/main/examples/scaffolding-pdbs) folder. We also provide
We provide pdb files used for conditionally generating MSAs in the [examples/scaffolding-msas](https://github.com/microsoft/evodiff/tree/main/examples/scaffolding-msas) folder.
For the scaffolding structural motifs task, we use the baselines compiled in RFDiffusion. We provide pdb and fasta files used for conditionally generating sequences in the [examples/scaffolding-pdbs](https://github.com/microsoft/evodiff/tree/main/examples/scaffolding-pdbs) folder. We also provide pdb files used for conditionally generating MSAs in the [examples/scaffolding-msas](https://github.com/microsoft/evodiff/tree/main/examples/scaffolding-msas) folder.

To access the UniRef50 test sequences, use the following code:
```
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