small tests update

mikolmogorov · Sep 16, 2019 · 93c82ec · 93c82ec
1 parent 80bf3fe
commit 93c82ec
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Showing 4 changed files with 3 additions and 3 deletions.
diff --git a/flye/tests/ecoli_500kb.fasta → flye/tests/data/ecoli_500kb.fasta b/flye/tests/ecoli_500kb.fasta → flye/tests/data/ecoli_500kb.fasta
diff --git a/flye/tests/ecoli_500kb_reads.fastq.gz → flye/tests/data/ecoli_500kb_reads.fastq.gz b/flye/tests/ecoli_500kb_reads.fastq.gz → flye/tests/data/ecoli_500kb_reads.fastq.gz
diff --git a/flye/tests/test_toy.py b/flye/tests/test_toy.py
@@ -24,7 +24,7 @@ def test_toy():
 
     print("Running toy test:\n")
     script_dir = os.path.dirname(os.path.realpath(__file__))
-    reads_file = os.path.join(script_dir, "ecoli_500kb_reads.fastq.gz")
+    reads_file = os.path.join(script_dir, "data", "ecoli_500kb_reads.fastq.gz")
     out_dir = "flye_toy_test"
     subprocess.check_call(["flye", "--pacbio-raw", reads_file, "-g", "500k",
                            "-o", out_dir, "-t", "8", "-m", "1000"])

diff --git a/setup.py b/setup.py
@@ -66,15 +66,15 @@ def run(self):
 
 setup(name='flye',
       version=__version__,
-      description='Fast and accurate de novo assembler for single molecule sequencing reads',
+      description='De novo assembler for single molecule sequencing reads using repeat graphs',
       url='https://github.com/fenderglass/Flye',
       author='Mikhail Kolmogorov',
       author_email = 'fenderglass@gmail.com',
       license='BSD-3-Clause',
       packages=['flye', 'flye/assembly', 'flye/config', 'flye/polishing',
                 'flye/utils', 'flye/repeat_graph', 'flye/short_plasmids',
                 'flye/trestle', 'flye/tests'],
-      package_data={'flye': ['config/bin_cfg/*']},
+      package_data={'flye': ['config/bin_cfg/*', 'tests/data/*']},
       entry_points={'console_scripts': ['flye = flye.main:main']},
       cmdclass={'build': MakeBuild,
                 'install' : MakeInstall}