get java dependencies in github actions workflow

mkoohafkan · Dec 18, 2023 · aa9422f · aa9422f
1 parent c799bbe
commit aa9422f
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diff --git a/.github/workflows/R-CMD-check.yaml b/.github/workflows/R-CMD-check.yaml
@@ -20,9 +20,9 @@ jobs:
         config:
           - {os: macos-latest,   r: 'release'}
           - {os: windows-latest, r: 'release'}
-          - {os: ubuntu-latest,   r: 'devel', http-user-agent: 'release'}
+#          - {os: ubuntu-latest,   r: 'devel', http-user-agent: 'release'}
           - {os: ubuntu-latest,   r: 'release'}
-          - {os: ubuntu-latest,   r: 'oldrel-1'}
+#          - {os: ubuntu-latest,   r: 'oldrel-1'}
 
     env:
       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
@@ -44,9 +44,67 @@ jobs:
           extra-packages: any::rcmdcheck
           needs: check
 
-      - name: Import data
-        run: Rscript -e 'library(rJava);.jinit()'
+      - uses: stCarolas/setup-maven@v4.5
 
+      - uses: s4u/maven-settings-action@v2.8.0
+
+      - name: download dependencies
+        run: |
+          echo ::group::Download flogger
+          mvn -Dmaven.repo.local='${{ runner.temp }}/temp_repo' dependency:get -Dartifact='com.google.flogger:flogger-system-backend:0.7.4:jar'
+          mvn -Dmaven.repo.local='${{ runner.temp }}/temp_repo' dependency:get -Dartifact='com.google.flogger:flogger:0.7.4:jar'
+          echo ::endgroup::
+          echo ::group::Download HEC Monolith
+          mvn -Dmaven.repo.local='${{ runner.temp }}/temp_repo' dependency:get -Dartifact='mil.army.usace.hec:hec-monolith-compat:3.3.16:jar' -DremoteRepositories='https://www.hec.usace.army.mil/nexus/repository/maven-releases'
+          mvn -Dmaven.repo.local='${{ runner.temp }}/temp_repo' dependency:get -Dartifact='mil.army.usace.hec:hec-monolith:3.3.16:jar' -DremoteRepositories='https://www.hec.usace.army.mil/nexus/repository/maven-releases'
+          echo ::endgroup::
+          echo ::group::Download HEC Nucleus
+          mvn -Dmaven.repo.local='${{ runner.temp }}/temp_repo' dependency:get -Dartifact='mil.army.usace.hec:hec-nucleus-data:2.0.1:jar' -DremoteRepositories='https://www.hec.usace.army.mil/nexus/repository/maven-releases'
+          mvn -Dmaven.repo.local='${{ runner.temp }}/temp_repo' dependency:get -Dartifact='mil.army.usace.hec:hec-nucleus-metadata:2.0.1:jar' -DremoteRepositories='https://www.hec.usace.army.mil/nexus/repository/maven-releases'
+          echo ::endgroup::
+          echo ::group::Download hecnf
+          mvn -Dmaven.repo.local='${{ runner.temp }}/temp_repo' dependency:get -Dartifact='mil.army.usace.hec:hecnf:6.0.00.100:jar' -DremoteRepositories='https://www.hec.usace.army.mil/nexus/repository/maven-releases'
+          echo ::endgroup::
+          echo ::group::Download javaHeclib
+          if [ "$RUNNER_OS" == "Linux" ]; then
+            mvn -Dmaven.repo.local='${{ runner.temp }}/temp_repo' dependency:get -Dartifact='mil.army.usace.hec:javaHeclib:7-IQ-11-linux-x86_64:zip' -DremoteRepositories='https://www.hec.usace.army.mil/nexus/repository/maven-releases'
+          elif [ "$RUNNER_OS" == "Windows" ]; then
+            mvn -Dmaven.repo.local='${{ runner.temp }}/temp_repo' dependency:get -Dartifact='mil.army.usace.hec:javaHeclib:7-IQ-11-win-x86_64:zip' -DremoteRepositories='https://www.hec.usace.army.mil/nexus/repository/maven-releases'
+          elif [ "$RUNNER_OS" == "macOS" ]; then
+            mvn -Dmaven.repo.local='${{ runner.temp }}/temp_repo' dependency:get -Dartifact='mil.army.usace.hec:javaHeclib:7-IQ-11-macOS-x86_64:zip' -DremoteRepositories='https://www.hec.usace.army.mil/nexus/repository/maven-releases'
+          else
+            echo "$RUNNER_OS not supported"
+            exit 1
+          fi
+          echo ::endgroup::
+          echo ::group::Copy dependencies to directory
+          mkdir -p '${{ runner.temp }}/.dssrip2/jar' '${{ runner.temp }}/.dssrip2/lib'
+          cp \
+            '${{ runner.temp }}/temp_repo/mil/army/usace/hec/hec-nucleus-data/2.0.1/hec-nucleus-data-2.0.1.jar' \
+            '${{ runner.temp }}/temp_repo/mil/army/usace/hec/hec-nucleus-metadata/2.0.1/hec-nucleus-metadata-2.0.1.jar' \
+            '${{ runner.temp }}/temp_repo/mil/army/usace/hec/hec-monolith-compat/3.3.16/hec-monolith-compat-3.3.16.jar' \
+            '${{ runner.temp }}/temp_repo/mil/army/usace/hec/hec-monolith/3.3.16/hec-monolith-3.3.16.jar' \
+            '${{ runner.temp }}/temp_repo/com/google/flogger/flogger-system-backend/0.7.4/flogger-system-backend-0.7.4.jar' \
+            '${{ runner.temp }}/temp_repo/com/google/flogger/flogger/0.7.4/flogger-0.7.4.jar' \
+            '${{ runner.temp }}/temp_repo/mil/army/usace/hec/hecnf/6.0.00.100/hecnf-6.0.00.100.jar' \
+            '${{ runner.temp }}/.dssrip2/jar'
+          if [ "$RUNNER_OS" == "Linux" ]; then
+            7z e '${{ runner.temp }}/temp_repo/mil/army/usace/hec/javaHeclib/7-IQ-11-linux-x86_64/javaHeclib-7-IQ-11-linux-x86_64.zip' \
+              -o'${{ runner.temp }}/.dssrip2/lib'
+          elif [ "$RUNNER_OS" == "Windows" ]; then
+            7z e '${{ runner.temp }}/temp_repo/mil/army/usace/hec/javaHeclib/7-IQ-11-win-x86_64/javaHeclib-7-IQ-11-win-x86_64.zip' \
+              -o'${{ runner.temp }}/.dssrip2/lib'
+          elif [ "$RUNNER_OS" == "macOS" ]; then
+            7z e '${{ runner.temp }}/temp_repo/mil/army/usace/hec/javaHeclib/7-IQ-11-macOS-x86_64/javaHeclib-7-IQ-11-macOS-x86_64.zip' \
+              -o'${{ runner.temp }}/.dssrip2/lib'
+          else
+            echo "$RUNNER_OS not supported"
+            exit 1
+          fi
+          echo "DSS_HOME_CI=${{ runner.temp }}/.dssrip2" >> $GITHUB_ENV
+          echo ::endgroup::
+        shell: bash
+
       - uses: r-lib/actions/check-r-package@v2
         with:
           upload-snapshots: true
diff --git a/tests/testthat/helper.R b/tests/testthat/helper.R
diff --git a/tests/testthat/setup.R b/tests/testthat/setup.R
@@ -0,0 +1,17 @@
+skip_if_no_dss = function() {
+  skip_on_cran()
+
+  if (isTRUE(as.logical(Sys.getenv("CI", "false")))) {
+      # look for .dssrip2 folder in temp directory
+      dss_home_ci = Sys.getenv("DSS_HOME_CI")
+      if (nzchar(dss_home_ci)) {
+        dss_connect(dss_home_ci, monolith = TRUE)
+        return(invisible(TRUE))
+      }
+  } else {
+    if (dss_require()) {
+      return(invisible(TRUE))
+    }
+  }
+  skip("Could not connect to DSS")
+}