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Get your sequences in a compact way
Marcin Magnus edited this page May 15, 2019
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2 revisions
181021
Get your sequences in a compact way:
[mm] structures$ git:(master) ✗ rna_pdb_toolsx.py --get_seq --uniq '[:5]' --compact *
GGGUCGUGACUGGCGAACAGGUGGGAAACCACCGGGGAGCGACCCCGGCAUCGAUAGCCGCCCGCCUGGGC # A:1-71 # rp13_20569fa1_ALL-000001_AA
ACCUUGCGCGACUGGCGAAUCCUGAAGCUGCUUUGAGCGGCUUCGACAUGUGGGGCAGCGACCACGAGGAAGCGCAAGGUUUCUGGCGUCAUGCACAACGGCGCCUGCCGCUCGCCUGGGCAG # A:1-123 # rp13cp0016_min.out.1
ACCUUGCGCAACUGGCGAAUCCUGGGGCUGCCGCCGGCAGUACCCGGCAGUGGGCGUUGACCACGAGGAAGCGCAAGGUCUCUGGCGUCAUGCACAACGACGCCUGCCGCUCGCCUGGGCA # A:1-121 # rp13nc3295_min.out.1
GGGUCGUGACUGGCGAACAGGUGGGAAACCACCGGGGAGCGACCCGCCGCCCGCCUGGGC # A:1-45 57-71 # solution
GCCCGUUCGCGUGACUGGCGCUAGUGAUGGGGAACCAUCGGGGAGCGCGAACCACAUCGCCGCGCGCCUGGGCUCCUCGA # A:1-80 # zaa_6a68812b_ALL-000001_AA
UGAGUUUUCUGCGACUGACGGAUUAUUGCAGAGCACUGCAAGGGAACAGAAAAACUCUUUUUCAGCCGACCGUCUGGGCACACCUG # A:1-86 # zbaa_684ef8ce_ALL-000001_AA
ACCUUGCGCGACUGGCGAAUCCUGAAGCUGCUUUGAGCGGCUUCGACAUGUGGGGCAGCGACCACGAGGAAGCGCAAGGUUUCUGGCGUCAUGCACAACGGCGCCUGCCGCUCGCCUGGGCAG # A:1-123 # zcp_6537608a_ALL-000001_AA
GCUCUCGCGCGACUGGCGACUUUGGAUGGAGCACCAUCGGGGAGCGCGGGAUCGACCGCCGUGCGCCUGGGC # A:1-72 # znc_a1ea6711_ALL-000001_AA
and with chain id first:
[mm] structures$ git:(master) ✗ rna_pdb_toolsx.py --get_seq --uniq '[:5]' --compact --chain-first *
A:1-71 GGGUCGUGACUGGCGAACAGGUGGGAAACCACCGGGGAGCGACCCCGGCAUCGAUAGCCGCCCGCCUGGGC # rp13_20569fa1_ALL-000001_AA
A:1-123 ACCUUGCGCGACUGGCGAAUCCUGAAGCUGCUUUGAGCGGCUUCGACAUGUGGGGCAGCGACCACGAGGAAGCGCAAGGUUUCUGGCGUCAUGCACAACGGCGCCUGCCGCUCGCCUGGGCAG # rp13cp0016_min.out.1
A:1-121 ACCUUGCGCAACUGGCGAAUCCUGGGGCUGCCGCCGGCAGUACCCGGCAGUGGGCGUUGACCACGAGGAAGCGCAAGGUCUCUGGCGUCAUGCACAACGACGCCUGCCGCUCGCCUGGGCA # rp13nc3295_min.out.1
A:1-45 57-71 GGGUCGUGACUGGCGAACAGGUGGGAAACCACCGGGGAGCGACCCGCCGCCCGCCUGGGC # solution
A:1-80 GCCCGUUCGCGUGACUGGCGCUAGUGAUGGGGAACCAUCGGGGAGCGCGAACCACAUCGCCGCGCGCCUGGGCUCCUCGA # zaa_6a68812b_ALL-000001_AA
A:1-86 UGAGUUUUCUGCGACUGACGGAUUAUUGCAGAGCACUGCAAGGGAACAGAAAAACUCUUUUUCAGCCGACCGUCUGGGCACACCUG # zbaa_684ef8ce_ALL-000001_AA
A:1-123 ACCUUGCGCGACUGGCGAAUCCUGAAGCUGCUUUGAGCGGCUUCGACAUGUGGGGCAGCGACCACGAGGAAGCGCAAGGUUUCUGGCGUCAUGCACAACGGCGCCUGCCGCUCGCCUGGGCAG # zcp_6537608a_ALL-000001_AA
A:1-72 GCUCUCGCGCGACUGGCGACUUUGGAUGGAGCACCAUCGGGGAGCGCGGGAUCGACCGCCGUGCGCCUGGGC # znc_a1ea6711_ALL-000001_AA
which of course your can sort:
[mm] structures$ git:(master) ✗ rna_pdb_toolsx.py --get_seq --uniq '[:5]' --compact --chain-first * | sort
A:1-121 ACCUUGCGCAACUGGCGAAUCCUGGGGCUGCCGCCGGCAGUACCCGGCAGUGGGCGUUGACCACGAGGAAGCGCAAGGUCUCUGGCGUCAUGCACAACGACGCCUGCCGCUCGCCUGGGCA # rp13nc3295_min.out.1
A:1-123 ACCUUGCGCGACUGGCGAAUCCUGAAGCUGCUUUGAGCGGCUUCGACAUGUGGGGCAGCGACCACGAGGAAGCGCAAGGUUUCUGGCGUCAUGCACAACGGCGCCUGCCGCUCGCCUGGGCAG # rp13cp0016_min.out.1
A:1-123 ACCUUGCGCGACUGGCGAAUCCUGAAGCUGCUUUGAGCGGCUUCGACAUGUGGGGCAGCGACCACGAGGAAGCGCAAGGUUUCUGGCGUCAUGCACAACGGCGCCUGCCGCUCGCCUGGGCAG # zcp_6537608a_ALL-000001_AA
A:1-45 57-71 GGGUCGUGACUGGCGAACAGGUGGGAAACCACCGGGGAGCGACCCGCCGCCCGCCUGGGC # solution
A:1-71 GGGUCGUGACUGGCGAACAGGUGGGAAACCACCGGGGAGCGACCCCGGCAUCGAUAGCCGCCCGCCUGGGC # rp13_20569fa1_ALL-000001_AA
A:1-72 GCUCUCGCGCGACUGGCGACUUUGGAUGGAGCACCAUCGGGGAGCGCGGGAUCGACCGCCGUGCGCCUGGGC # znc_a1ea6711_ALL-000001_AA
A:1-80 GCCCGUUCGCGUGACUGGCGCUAGUGAUGGGGAACCAUCGGGGAGCGCGAACCACAUCGCCGCGCGCCUGGGCUCCUCGA # zaa_6a68812b_ALL-000001_AA
A:1-86 UGAGUUUUCUGCGACUGACGGAUUAUUGCAGAGCACUGCAAGGGAACAGAAAAACUCUUUUUCAGCCGACCGUCUGGGCACACCUG # zbaa_684ef8ce_ALL-000001_AA
Another example:
[mm] rp20$ git:(master) ✗ rna_pdb_toolsx.py --get_seq --compact *.pdb
# 20_Bujnicki_1
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # A:1-68
# 20_Bujnicki_2
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # A:1-68
# 20_Bujnicki_3
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # A:1-68
# 20_Bujnicki_4
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # A:1-68
# 20_Bujnicki_5
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # A:1-68
# 20_Das_1
ACCCGCAAGGCCGACGGC # A:1-18 GCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # B:1-50
# 20_Das_2
ACCCGCAAGGCCGACGGC # A:1-18 GCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # B:1-50
# 20_Das_3
ACCCGCAAGGCCGACGGC # A:1-18 GCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # B:1-50
# 20_Das_4
ACCCGCAAGGCCGACGGC # A:1-18 GCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # B:1-50
# 20_Das_5
ACCCGCAAGGCCGACGGC # A:1-18 GCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # B:1-50
# 20_RNAComposerHuman_1
ACCCGCAAGGCCGACGGC # A:1-18 GCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # B:1-50
# 20_RNAComposerHuman_2
ACCCGCAAGGCCGACGGC # A:1-18 GCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # B:1-50
# 20_RNAComposerHuman_3
ACCCGCAAGGCCGACGGC # A:1-18 GCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # B:1-50
# 20_RNAComposerHuman_4
ACCCGCAAGGCCGACGGC # A:1-18 GCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # B:1-50
# 20_RNAComposerHuman_5
ACCCGCAAGGCCGACGGC # A:1-18 GCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # B:1-50
# 20_RNAComposer_1
ACCCGCAAGGCCGACGGC # A:1-18 GCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # B:1-50
# 20_RNAComposer_2
ACCCGCAAGGCCGACGGC # A:1-18 GCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # B:1-50
# 20_RNAComposer_3
ACCCGCAAGGCCGACGGC # A:1-18 GCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # B:1-50
# 20_RNAComposer_4
ACCCGCAAGGCCGACGGC # A:1-18 GCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # B:1-50
# 20_RNAComposer_5
ACCCGCAAGGCCGACGGC # A:1-18 GCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # B:1-50
# 20_RW3D_1
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # A:1-68
# 20_RW3D_10
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # A:1-68
# 20_RW3D_2
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # A:1-68
# 20_RW3D_3
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # A:1-68
# 20_RW3D_4
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # A:1-68
# 20_RW3D_5
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # A:1-68
# 20_RW3D_6
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # A:1-68
# 20_RW3D_7
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # A:1-68
# 20_RW3D_8
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # A:1-68
# 20_RW3D_9
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # A:1-68
# 20_Xiao2_1
ACCUCAAGGGGCGGCGGCGCCCGCACCGGUGAAAGGCCGGUUCCCGUCCGGCGCGGCCGCUCAGAGGU # A:1-68
# 20_Xiao2_2
ACCCGCAAGGCGAAAGGCGGCGCCGCGGGUUCAAGUCCCGCAACGCUUCGGCGUUGCCGCCGAUCGGU # A:1-68
# 20_Xiao2_3
ACCGAGGGCAAGUCAGGCGGCGCCGCUGGUGAAAUUCCAGCUCCGCUUCGGCGGGGCCGCCGCUCGGU # A:1-68
# 20_Xiao2_4
ACCCACAAGGCCAAAGAUUCGGCCACGGGUUCAAGUCCCGUUCCGCUUUGGCGUGGGCGGCCAUGGGU # A:1-68
# 20_Xiao2_5
ACCCGCAAGGCCCUCCGCGCCGCCGCCGGUGAAAUUCCGGCCCCGCUUCGGCGGGGGCGCGUAGGGGU # A:1-68
# 20_Xiao3_1
ACCCGCAAGGCCGACGGC # A:1-18 GCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # B:1-50
# 20_Xiao3_2
ACCCGCAAGGCCGACGGC # A:1-18 GCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # B:1-50
# 20_Xiao3_3
ACCCGCAAGGCCGACGGC # A:1-18 GCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # B:1-50
# 20_Xiao3_4
ACCCGCAAGGCCGACGGC # A:1-18 GCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # B:1-50
# 20_Xiao3_5
ACCCGCAAGGCCGACGGC # A:1-18 GCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # B:1-50
# 20_Xiao_1
ACCUCAAGGGGCGGCGGCGCCCGCACCGGUGAAAGGCCGGUUCCCGUCCGGCGCGGCCGCUCAGAGGU # A:1-68
# 20_Xiao_2
ACCCGCAAGGCGAAAGGCGGCGCCGCGGGUUCAAGUCCCGCAACGCUUCGGCGUUGCCGCCGAUCGGU # A:1-68
# 20_Xiao_3
ACCGAGGGCAAGUCAGGCGGCGCCGCUGGUGAAAUUCCAGCUCCGCUUCGGCGGGGCCGCCGCUCGGU # A:1-68
# 20_Xiao_4
ACCCACAAGGCCAAAGAUUCGGCCACGGGUUCAAGUCCCGUUCCGCUUUGGCGUGGGCGGCCAUGGGU # A:1-68
# 20_Xiao_5
ACCCGCAAGGCCCUCCGCGCCGCCGCCGGUGAAAUUCCGGCCCCGCUUCGGCGGGGGCGCGUAGGGGU # A:1-68
# 20_simRNA_1
ACCCGCAAGGCCGACGGC # A:1-18 GCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # B:1-50
# 20_simRNA_2
ACCCGCAAGGCCGACGGC # A:1-18 GCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # B:1-50
# 20_simRNA_3
ACCCGCAAGGCCGACGGC # A:1-18 GCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # B:1-50
# 20_simRNA_4
ACCCGCAAGGCCGACGGC # A:1-18 GCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # B:1-50
# 20_simRNA_5
ACCCGCAAGGCCGACGGC # A:1-18 GCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # B:1-50
# 20_solution_0
ACCCGCAAGGCCGACGGC # A:1-18 GCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # B:1-50
or with --online:
[mm] rna_pdb_toolsx.py --get_seq --compact *.pdb --oneline
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # A:1-68 # 20_Bujnicki_1
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # A:1-68 # 20_Bujnicki_2
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # A:1-68 # 20_Bujnicki_3
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # A:1-68 # 20_Bujnicki_4
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # A:1-68 # 20_Bujnicki_5
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # A:1-68 # 20_RW3D_1
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # A:1-68 # 20_RW3D_10
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # A:1-68 # 20_RW3D_2
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # A:1-68 # 20_RW3D_3
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # A:1-68 # 20_RW3D_4
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # A:1-68 # 20_RW3D_5
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # A:1-68 # 20_RW3D_6
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # A:1-68 # 20_RW3D_7
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # A:1-68 # 20_RW3D_8
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU # A:1-68 # 20_RW3D_9
ACCUCAAGGGGCGGCGGCGCCCGCACCGGUGAAAGGCCGGUUCCCGUCCGGCGCGGCCGCUCAGAGGU # A:1-68 # 20_Xiao2_1
ACCCGCAAGGCGAAAGGCGGCGCCGCGGGUUCAAGUCCCGCAACGCUUCGGCGUUGCCGCCGAUCGGU # A:1-68 # 20_Xiao2_2
ACCGAGGGCAAGUCAGGCGGCGCCGCUGGUGAAAUUCCAGCUCCGCUUCGGCGGGGCCGCCGCUCGGU # A:1-68 # 20_Xiao2_3
ACCCACAAGGCCAAAGAUUCGGCCACGGGUUCAAGUCCCGUUCCGCUUUGGCGUGGGCGGCCAUGGGU # A:1-68 # 20_Xiao2_4
ACCCGCAAGGCCCUCCGCGCCGCCGCCGGUGAAAUUCCGGCCCCGCUUCGGCGGGGGCGCGUAGGGGU # A:1-68 # 20_Xiao2_5
ACCUCAAGGGGCGGCGGCGCCCGCACCGGUGAAAGGCCGGUUCCCGUCCGGCGCGGCCGCUCAGAGGU # A:1-68 # 20_Xiao_1
ACCCGCAAGGCGAAAGGCGGCGCCGCGGGUUCAAGUCCCGCAACGCUUCGGCGUUGCCGCCGAUCGGU # A:1-68 # 20_Xiao_2
ACCGAGGGCAAGUCAGGCGGCGCCGCUGGUGAAAUUCCAGCUCCGCUUCGGCGGGGCCGCCGCUCGGU # A:1-68 # 20_Xiao_3
ACCCACAAGGCCAAAGAUUCGGCCACGGGUUCAAGUCCCGUUCCGCUUUGGCGUGGGCGGCCAUGGGU # A:1-68 # 20_Xiao_4
ACCCGCAAGGCCCUCCGCGCCGCCGCCGGUGAAAUUCCGGCCCCGCUUCGGCGGGGGCGCGUAGGGGU # A:1-68 # 20_Xiao_5
or as a fasta:
[mm] ✗ rna_pdb_toolsx.py --get_seq --compact --fasta *.pdb
> 20_Bujnicki_1
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU
> 20_Bujnicki_2
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU
> 20_Bujnicki_3
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU
> 20_Bujnicki_4
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU
> 20_Bujnicki_5
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU
> 20_RW3D_1
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU
> 20_RW3D_10
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU
> 20_RW3D_2
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU
> 20_RW3D_3
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU
> 20_RW3D_4
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU
> 20_RW3D_5
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU
> 20_RW3D_6
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU
> 20_RW3D_7
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU
> 20_RW3D_8
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU
> 20_RW3D_9
ACCCGCAAGGCCGACGGCGCCGCCGCUGGUGCAAGUCCAGCCACGCUUCGGCGUGGGCGCUCAUGGGU
> 20_Xiao2_1
ACCUCAAGGGGCGGCGGCGCCCGCACCGGUGAAAGGCCGGUUCCCGUCCGGCGCGGCCGCUCAGAGGU
> 20_Xiao2_2
ACCCGCAAGGCGAAAGGCGGCGCCGCGGGUUCAAGUCCCGCAACGCUUCGGCGUUGCCGCCGAUCGGU
> 20_Xiao2_3
ACCGAGGGCAAGUCAGGCGGCGCCGCUGGUGAAAUUCCAGCUCCGCUUCGGCGGGGCCGCCGCUCGGU
> 20_Xiao2_4
ACCCACAAGGCCAAAGAUUCGGCCACGGGUUCAAGUCCCGUUCCGCUUUGGCGUGGGCGGCCAUGGGU
> 20_Xiao2_5
ACCCGCAAGGCCCUCCGCGCCGCCGCCGGUGAAAUUCCGGCCCCGCUUCGGCGGGGGCGCGUAGGGGU
> 20_Xiao_1
ACCUCAAGGGGCGGCGGCGCCCGCACCGGUGAAAGGCCGGUUCCCGUCCGGCGCGGCCGCUCAGAGGU
> 20_Xiao_2
ACCCGCAAGGCGAAAGGCGGCGCCGCGGGUUCAAGUCCCGCAACGCUUCGGCGUUGCCGCCGAUCGGU
> 20_Xiao_3
ACCGAGGGCAAGUCAGGCGGCGCCGCUGGUGAAAUUCCAGCUCCGCUUCGGCGGGGCCGCCGCUCGGU
> 20_Xiao_4
ACCCACAAGGCCAAAGAUUCGGCCACGGGUUCAAGUCCCGUUCCGCUUUGGCGUGGGCGGCCAUGGGU
> 20_Xiao_5
ACCCGCAAGGCCCUCCGCGCCGCCGCCGGUGAAAUUCCGGCCCCGCUUCGGCGGGGGCGCGUAGGGGU