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[ENH, WIP] Add multivariate connectivity methods #138

Merged
merged 67 commits into from
Jul 18, 2023
Merged

[ENH, WIP] Add multivariate connectivity methods #138

merged 67 commits into from
Jul 18, 2023

Commits on Feb 22, 2023

  1. add multivariate con base class

    @tsbinns
    tsbinns committed Feb 22, 2023
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  2. add multivariate imcoh classes

    @tsbinns
    tsbinns committed Feb 22, 2023
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  3. bug fix incorrect import

    @tsbinns
    tsbinns committed Feb 22, 2023
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Commits on Feb 23, 2023

  1. add text for mic mim examples

    @tsbinns
    tsbinns committed Feb 23, 2023
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  2. add correction for mic when seeds==targets

    @tsbinns
    tsbinns committed Feb 23, 2023
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  3. update example text

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    tsbinns committed Feb 23, 2023
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Commits on Feb 25, 2023

  1. add multivar methods

    @tsbinns
    tsbinns committed Feb 25, 2023
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  2. Revert "update example text" 

    This reverts commit 63ed328.
    @tsbinns
    tsbinns committed Feb 25, 2023
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  3. Revert "add correction for mic when seeds==targets" 

    This reverts commit 953ecff.
    @tsbinns
    tsbinns committed Feb 25, 2023
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  4. Revert "add text for mic mim examples" 

    This reverts commit a25bda7.
    @tsbinns
    tsbinns committed Feb 25, 2023
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  5. Revert "bug fix incorrect import" 

    This reverts commit fe0ab9b.
    @tsbinns
    tsbinns committed Feb 25, 2023
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  6. Revert "add multivariate imcoh classes" 

    This reverts commit 73791c0.
    @tsbinns
    tsbinns committed Feb 25, 2023
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  7. Revert "add multivariate con base class" 

    This reverts commit 446c7fe.
    @tsbinns
    tsbinns committed Feb 25, 2023
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  8. update indenting

    @tsbinns
    tsbinns committed Feb 25, 2023
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  9. remove gc code

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    tsbinns committed Feb 25, 2023
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Commits on Feb 26, 2023

  1. add patterns and rank attrs to base class

    @tsbinns
    tsbinns committed Feb 26, 2023
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  2. add code to mic/mim example

    @tsbinns
    tsbinns committed Feb 26, 2023
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  3. bug fix multivar methods

    @tsbinns
    tsbinns committed Feb 26, 2023
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  4. update example and add references

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    tsbinns committed Feb 26, 2023
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Commits on Feb 28, 2023

  1. bug fix unsuitable indices and method storage

    @tsbinns
    tsbinns committed Feb 28, 2023
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  2. Revert "bug fix unsuitable indices and method storage" 

    This reverts commit aa8d6a3.
    @tsbinns
    tsbinns committed Feb 28, 2023
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  3. bug fix incorrect method format

    @tsbinns
    tsbinns committed Feb 28, 2023
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  4. bug fix incorrect indexing

    @tsbinns
    tsbinns committed Feb 28, 2023
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Commits on Mar 7, 2023

  1. bug fix invalid channel type

    @tsbinns
    tsbinns committed Mar 7, 2023
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  2. bug fix incorrect ch names

    @tsbinns
    tsbinns committed Mar 7, 2023
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Commits on Apr 15, 2023

  1. fixed references

    @tsbinns
    tsbinns committed Apr 15, 2023
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  2. fixed references

    @tsbinns
    tsbinns committed Apr 15, 2023
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  3. added gc support

    @tsbinns
    tsbinns committed Apr 15, 2023
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  4. updated example

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    tsbinns committed Apr 15, 2023
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  5. added gc example

    @tsbinns
    tsbinns committed Apr 15, 2023
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Commits on Apr 16, 2023

  1. updated examples

    @tsbinns
    tsbinns committed Apr 16, 2023
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  2. renamed method

    @tsbinns
    tsbinns committed Apr 16, 2023
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  3. updated GC classes

    @tsbinns
    tsbinns committed Apr 16, 2023
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  4. updated GC classes

    @tsbinns
    tsbinns committed Apr 16, 2023
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  5. updated GC classes

    @tsbinns
    tsbinns committed Apr 16, 2023
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  6. updated example

    @tsbinns
    tsbinns committed Apr 16, 2023
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Commits on Apr 17, 2023

  1. updated gc and example

    @tsbinns
    tsbinns committed Apr 17, 2023
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Commits on Apr 22, 2023

  1. updated examples

    @tsbinns
    tsbinns committed Apr 22, 2023
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  2. bug fix indices

    @tsbinns
    tsbinns committed Apr 22, 2023
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  3. reverted tests

    @tsbinns
    tsbinns committed Apr 22, 2023
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  4. Merge branch 'mne-tools:main' into main

    @tsbinns
    tsbinns committed Apr 22, 2023
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  5. Merge branch 'main' into mvc

    @tsbinns
    tsbinns committed Apr 22, 2023
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  6. updated rank checks

    @tsbinns
    tsbinns committed Apr 22, 2023
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  7. added gc indices check

    @tsbinns
    tsbinns committed Apr 22, 2023
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  8. updated mic/mim error msg

    @tsbinns
    tsbinns committed Apr 22, 2023
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  9. added mvc tests

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    tsbinns committed Apr 22, 2023
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Commits on Apr 23, 2023

  1. bug fix indexing

    @tsbinns
    tsbinns committed Apr 23, 2023
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  2. updated docs

    @tsbinns
    tsbinns committed Apr 23, 2023
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  3. I cannot spell

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    tsbinns committed Apr 23, 2023
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Commits on Apr 26, 2023

  1. renamed multivar test

    @tsbinns
    tsbinns committed Apr 26, 2023
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  2. added multivar parallel test

    @tsbinns
    tsbinns committed Apr 26, 2023
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  3. removed assert

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    tsbinns committed Apr 26, 2023
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Commits on May 2, 2023

  1. Merge branch 'main' into pr-2023_04_23

    @adam2392
    adam2392 committed May 2, 2023
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Commits on May 21, 2023

  1. removed explicit attrs

    @tsbinns
    tsbinns committed May 21, 2023
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  2. updated examples

    @tsbinns
    tsbinns committed May 21, 2023
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  3. updated docs and bug fix failing tests

    @tsbinns
    tsbinns committed May 21, 2023
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  4. quick fix pr errors

    @tsbinns
    tsbinns committed May 21, 2023
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Commits on Jun 30, 2023

  1. Squashed commit of the following: 

    commit 44e21fe
Author: Thomas Samuel Binns <t.s.binns@outlook.com>
Date:   Fri Jun 30 14:43:29 2023 +0200

    updated GC example

commit 648bb13
Author: Thomas Samuel Binns <t.s.binns@outlook.com>
Date:   Fri Jun 30 13:59:53 2023 +0200

    updated docs

commit 21a61a1
Author: Thomas Samuel Binns <t.s.binns@outlook.com>
Date:   Fri Jun 30 13:22:25 2023 +0200

    updated docs

commit 767719a
Author: Thomas Samuel Binns <t.s.binns@outlook.com>
Date:   Fri Jun 30 13:03:41 2023 +0200

    bug fix patterns indexing

commit cd06739
Author: Thomas Samuel Binns <t.s.binns@outlook.com>
Date:   Fri Jun 30 12:51:20 2023 +0200

    updated tests

commit 13335f8
Author: Thomas Samuel Binns <t.s.binns@outlook.com>
Date:   Fri Jun 30 12:05:08 2023 +0200

    updated tests

commit 962a1ac
Author: Thomas Samuel Binns <t.s.binns@outlook.com>
Date:   Thu Jun 29 16:49:53 2023 +0200

    bug fixes

commit 35f8b1f
Author: Thomas Samuel Binns <t.s.binns@outlook.com>
Date:   Thu Jun 29 16:02:34 2023 +0200

    bug fix patterns dims

commit 754dfc7
Author: Thomas Samuel Binns <t.s.binns@outlook.com>
Date:   Thu Jun 29 15:38:54 2023 +0200

    bug fixes

commit 9098b2e
Author: Thomas Samuel Binns <t.s.binns@outlook.com>
Date:   Thu Jun 29 15:38:41 2023 +0200

    updated tests

commit 9dbfa3b
Author: Thomas Samuel Binns <t.s.binns@outlook.com>
Date:   Tue Jun 27 17:55:04 2023 +0200

    removed redundant rank errors

commit 42d7097
Author: Thomas Samuel Binns <t.s.binns@outlook.com>
Date:   Tue Jun 27 17:50:58 2023 +0200

    updated examples

commit 2a8b711
Author: Thomas Samuel Binns <t.s.binns@outlook.com>
Date:   Tue Jun 27 17:44:05 2023 +0200

    updated time tests

commit 0c4d668
Author: Thomas Samuel Binns <t.s.binns@outlook.com>
Date:   Tue Jun 27 17:43:43 2023 +0200

    update mvc implementation

commit 9f3d533
Author: Thomas Samuel Binns <t.s.binns@outlook.com>
Date:   Tue Jun 27 17:42:46 2023 +0200

    bug fix rank estimation

commit 213e586
Author: Thomas Samuel Binns <t.s.binns@outlook.com>
Date:   Tue Jun 27 17:42:32 2023 +0200

    bug fix results storage

commit aa4598a
Author: Thomas Samuel Binns <t.s.binns@outlook.com>
Date:   Tue Jun 27 17:41:48 2023 +0200

    bug fix mic edge case

commit 1d8250e
Author: Thomas Samuel Binns <t.s.binns@outlook.com>
Date:   Tue Jun 27 17:41:12 2023 +0200

    updated patterns format

commit e018586
Author: Thomas Samuel Binns <t.s.binns@outlook.com>
Date:   Tue Jun 27 17:26:18 2023 +0200

    bug fix get_data

commit 3f9062e
Author: Thomas Samuel Binns <t.s.binns@outlook.com>
Date:   Mon Jun 26 18:54:39 2023 +0200

    added mvc methods

commit f2e4dad
Author: Thomas Samuel Binns <t.s.binns@outlook.com>
Date:   Mon Jun 26 18:54:22 2023 +0200

    bug fix mic

commit 2778693
Author: Thomas Samuel Binns <t.s.binns@outlook.com>
Date:   Mon Jun 26 18:54:10 2023 +0200

    updated examples
    @tsbinns
    tsbinns committed Jun 30, 2023
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  2. removed whitespace

    @tsbinns
    tsbinns committed Jun 30, 2023
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  3. attempt manifest fix

    @tsbinns
    tsbinns committed Jun 30, 2023
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Commits on Jul 14, 2023

  1. Merge branch 'main' into pr-2023_04_23

    @adam2392
    adam2392 committed Jul 14, 2023
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Commits on Jul 17, 2023

  1. implemented pr feedback

    @tsbinns
    tsbinns committed Jul 17, 2023
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  2. implemented pr feedback

    @tsbinns
    tsbinns committed Jul 17, 2023
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  3. Merge branch 'main' into pr-2023_04_23

    @tsbinns
    tsbinns committed Jul 17, 2023
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  4. updated authorship and whats_new

    @tsbinns
    tsbinns committed Jul 17, 2023
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Commits on Jul 18, 2023

  1. updated examples

    @tsbinns
    tsbinns committed Jul 18, 2023
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  2. updated author email

    @tsbinns
    tsbinns committed Jul 18, 2023
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