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MoSDeF - the Molecular Simulation Design Framework

MoSDeF builds, atom types, and parametrizes arbitrary chemical systems for molecular simulation in an engine agnostic manner.

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  1. mbuild mbuild Public

    A hierarchical, component based molecule builder

    Python 192 82

  2. foyer foyer Public

    A package for atom-typing as well as applying and disseminating forcefields

    Python 129 78

  3. gmso gmso Public

    Flexible storage of chemical topology for molecular simulation

    Python 62 36

  4. mosdef-workflows mosdef-workflows Public

    Sample molecular simulation workflows using a MoSDeF and community tools

    Jupyter Notebook 14 24

  5. mosdef_tutorials mosdef_tutorials Public

    A set of tutorials to introduce new users to the MoSDeF (Molecular Simulation Design Framework) toolkit

    Jupyter Notebook 26 19

  6. msibi msibi Public

    A package for managing pair-potential derivation using MultiState Iterative Boltzmann Inversion (MS-IBI)

    Python 13 13

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