Merge remote-tracking branch 'upstream/master'

README.md

@@ -1,7 +1,7 @@
 # facets
 Algorithm to implement Fraction and Allele specific Copy number Estimate from Tumor/normal Sequencing.
 
-**Travis CI** (_Linux & macOS_) [![Build Status](https://travis-ci.org/mskcc/facets.svg?branch=master)](https://travis-ci.org/mskcc/facets)  **Test coverage** [![codecov.io](https://codecov.io/github/mskcc/facets/coverage.svg?branch=master)](https://codecov.io/github/mskcc/facets?branch=master)
+**Travis CI** (_Linux & macOS_) [![Build Status](https://travis-ci.com/mskcc/facets.svg?branch=master)](https://travis-ci.com/mskcc/facets)  **Test coverage** [![codecov.io](https://codecov.io/github/mskcc/facets/coverage.svg?branch=master)](https://codecov.io/github/mskcc/facets?branch=master)
 
 You can install the current version (along with the vignette) using the command
 
@@ -14,6 +14,11 @@ pctGCdata is a required package. So install that also (needs to be done only onc
 ```R
 devtools::install_github("mskcc/pctGCdata")
 ```
+If you get an error message about pctGCdata use
+
+```R
+devtools::install_github("veseshan/pctGCdata")
+```
 
 ## NOTES