DCMReporter is a Python-based CLI aimed at testing the integrity of DICOM scans. The output of this tool can be used to analyze consistency of the number of files per protocol, per subject, in an entire study.
Disclaimer:
DCMReporter only works with DICOM files. This tool with ignore DICOM files compressed into another
folder such as .zip, .gz or .tar. Please ensure that contents of your DICOM study are completely
decompressed prior to running DCMReporter.
DCMReporter, being purely Python, depends on numpy, pandas, joblib, multiprocessing, and pydicom.
For Conda installation of dependencies, run:
conda install -c anaconda numpy pandas joblib
conda install -c conda-forge tqdm multiprocess pydicom
For PiPy installation, run:
pip install numpy, pandas, joblib, multiprocess, tqdm, pydicom
DCMReporter is fairly easy to use, with the following run context
python dcmreporter.py [options] input output
In it's current form, only the --nthreads flag works. All other flags are either a work-in-progrees, or intended for integration
with other tools.