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Variables fasta_fn and motif_descs are passed between three functions as follows:

_browser_files_main() --> write_all_browser_files() --> write_frac_wigs()

The two variables were swapped at both interfaces.


_browser_files_main() --> write_all_browser_files():

write_all_browser_files(
args.fast5_basedirs, args.control_fast5_basedirs, args.corrected_group,
args.basecall_subgroups, args.statistics_filename,
args.browser_file_basename, args.file_types, args.genome_fasta,
args.motif_descriptions)

def write_all_browser_files(
fast5s_dirs, ctrl_fast5s_dirs, corr_grp, bc_subgrps,
stats_fn, wig_base, wig_types, motif_descs, fasta_fn):

write_all_browser_files() --> write_frac_wigs():

write_frac_wigs(
all_stats, wig_base, FRAC_WIG_TYPE in wig_types,
DFRAC_WIG_TYPE in wig_types, STAT_WIG_TYPE in wig_types,
VCOV_WIG_TYPE in wig_types, motif_descs, fasta_fn)

def write_frac_wigs(
all_stats, wig_base, do_frac, do_damp, do_stats, do_vcov, fasta_fn,
motif_descs):

Variables `fasta_fn` and `motif_descs` are passed between three functions as follows:
_browser_files_main() --> write_all_browser_files() --> write_frac_wigs()
The two variables were swapped at both interfaces.
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