forked from ontoportal/ncbo_cron
-
Notifications
You must be signed in to change notification settings - Fork 6
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
- Loading branch information
Showing
15 changed files
with
499 additions
and
265 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,126 @@ | ||
| require 'logger' | ||
| require 'google/apis/analytics_v3' | ||
| require 'google/api_client/auth/key_utils' | ||
|
|
||
| module NcboCron | ||
| module Models | ||
|
|
||
| class OntologyAnalyticsUA | ||
|
|
||
| def initialize(logger) | ||
| @logger = logger | ||
| end | ||
|
|
||
| def run | ||
| redis = Redis.new(:host => NcboCron.settings.redis_host, :port => NcboCron.settings.redis_port) | ||
| ontology_analytics = fetch_ontology_analytics | ||
| File.open(NcboCron.settings.analytics_path_to_ua_data_file, 'w') do |f| | ||
| f.write(ontology_analytics.to_json) | ||
| end | ||
| end | ||
|
|
||
| def fetch_ontology_analytics | ||
| google_client = authenticate_google | ||
| aggregated_results = Hash.new | ||
| start_year = Date.parse(NcboCron.settings.analytics_start_date).year || 2013 | ||
| ont_acronyms = LinkedData::Models::Ontology.where.include(:acronym).all.map {|o| o.acronym} | ||
| # ont_acronyms = ["NCIT", "ONTOMA", "CMPO", "AEO", "SNOMEDCT"] | ||
| filter_str = (NcboCron.settings.analytics_filter_str.nil? || NcboCron.settings.analytics_filter_str.empty?) ? "" : ";#{NcboCron.settings.analytics_filter_str}" | ||
|
|
||
| ont_acronyms.each do |acronym| | ||
| max_results = 10000 | ||
| num_results = 10000 | ||
| start_index = 1 | ||
| results = nil | ||
|
|
||
| loop do | ||
| results = google_client.get_ga_data( | ||
| ids = NcboCron.settings.analytics_profile_id, | ||
| start_date = NcboCron.settings.analytics_start_date, | ||
| end_date = Date.today.to_s, | ||
| metrics = 'ga:pageviews', | ||
| { | ||
| dimensions: 'ga:pagePath,ga:year,ga:month', | ||
| filters: "ga:pagePath=~^(\\/ontologies\\/#{acronym})(\\/?\\?{0}|\\/?\\?{1}.*)$#{filter_str}", | ||
| start_index: start_index, | ||
| max_results: max_results | ||
| } | ||
| ) | ||
| results.rows ||= [] | ||
| start_index += max_results | ||
| num_results = results.rows.length | ||
| @logger.info "Acronym: #{acronym}, Results: #{num_results}, Start Index: #{start_index}" | ||
| @logger.flush | ||
|
|
||
| results.rows.each do |row| | ||
| if aggregated_results.has_key?(acronym) | ||
| # year | ||
| if aggregated_results[acronym].has_key?(row[1].to_i) | ||
| # month | ||
| if aggregated_results[acronym][row[1].to_i].has_key?(row[2].to_i) | ||
| aggregated_results[acronym][row[1].to_i][row[2].to_i] += row[3].to_i | ||
| else | ||
| aggregated_results[acronym][row[1].to_i][row[2].to_i] = row[3].to_i | ||
| end | ||
| else | ||
| aggregated_results[acronym][row[1].to_i] = Hash.new | ||
| aggregated_results[acronym][row[1].to_i][row[2].to_i] = row[3].to_i | ||
| end | ||
| else | ||
| aggregated_results[acronym] = Hash.new | ||
| aggregated_results[acronym][row[1].to_i] = Hash.new | ||
| aggregated_results[acronym][row[1].to_i][row[2].to_i] = row[3].to_i | ||
| end | ||
| end | ||
|
|
||
| if num_results < max_results | ||
| # fill up non existent years | ||
| (start_year..Date.today.year).each do |y| | ||
| aggregated_results[acronym] = Hash.new if aggregated_results[acronym].nil? | ||
| aggregated_results[acronym][y] = Hash.new unless aggregated_results[acronym].has_key?(y) | ||
| end | ||
| # fill up non existent months with zeros | ||
| (1..12).each { |n| aggregated_results[acronym].values.each { |v| v[n] = 0 unless v.has_key?(n) } } | ||
| break | ||
| end | ||
| end | ||
| end | ||
|
|
||
| @logger.info "Completed Universal Analytics pull..." | ||
| @logger.flush | ||
|
|
||
| aggregated_results | ||
| end | ||
|
|
||
| def authenticate_google | ||
| Google::Apis::ClientOptions.default.application_name = NcboCron.settings.analytics_app_name | ||
| Google::Apis::ClientOptions.default.application_version = NcboCron.settings.analytics_app_version | ||
| # enable google api call retries in order to | ||
| # minigate analytics processing failure due to occasional google api timeouts and other outages | ||
| Google::Apis::RequestOptions.default.retries = 5 | ||
| # uncoment to enable logging for debugging purposes | ||
| # Google::Apis.logger.level = Logger::DEBUG | ||
| # Google::Apis.logger = @logger | ||
| client = Google::Apis::AnalyticsV3::AnalyticsService.new | ||
| key = Google::APIClient::KeyUtils::load_from_pkcs12(NcboCron.settings.analytics_path_to_ua_key_file, 'notasecret') | ||
| client.authorization = Signet::OAuth2::Client.new( | ||
| :token_credential_uri => 'https://accounts.google.com/o/oauth2/token', | ||
| :audience => 'https://accounts.google.com/o/oauth2/token', | ||
| :scope => 'https://www.googleapis.com/auth/analytics.readonly', | ||
| :issuer => NcboCron.settings.analytics_service_account_email_address, | ||
| :signing_key => key | ||
| ).tap { |auth| auth.fetch_access_token! } | ||
| client | ||
| end | ||
| end | ||
| end | ||
| end | ||
|
|
||
| require 'ontologies_linked_data' | ||
| require 'goo' | ||
| require 'ncbo_annotator' | ||
| require 'ncbo_cron/config' | ||
| require_relative '../config/config' | ||
| ontology_analytics_log_path = File.join("logs", "ontology-analytics-ua.log") | ||
| ontology_analytics_logger = Logger.new(ontology_analytics_log_path) | ||
| NcboCron::Models::OntologyAnalyticsUA.new(ontology_analytics_logger).run |
Oops, something went wrong.