Multi host2 #188
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Multi host2 #188
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…ple hosts are being used as inputs.
…ontains these plus susceptibility.
wenzeslaus
reviewed
Jan 11, 2024
| PoPSModel::StandardMultiHostPool multi_host_pool({&host_pool}, config); | ||
| multi_host_pool.set_pest_host_table(pest_host_table); | ||
| multi_host_pool.set_competency_table(competency_table); | ||
| std::vector<std::unique_ptr<PoPSModel::StandardSingleHostPool>> host_pool_vector; |
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Suggested change
| std::vector<std::unique_ptr<PoPSModel::StandardSingleHostPool>> host_pool_vector; | |
| std::vector<PoPSModel::StandardSingleHostPool> host_pool_vector; |
wenzeslaus
reviewed
Jan 11, 2024
src/pops.cpp
Outdated
Comment on lines
275
to
293
| host_pool_vector.emplace_back(new PoPSModel::StandardSingleHostPool( | ||
| mt, | ||
| susceptible, | ||
| exposed, | ||
| config.latency_period_steps, | ||
| infected, | ||
| total_exposed, | ||
| resistant, | ||
| mortality_tracker, | ||
| mortality, | ||
| total_hosts, | ||
| model.environment(), | ||
| config.generate_stochasticity, | ||
| config.reproductive_rate, | ||
| config.establishment_stochasticity, | ||
| config.establishment_probability, | ||
| config.rows, | ||
| config.cols, | ||
| spatial_indices)); |
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Suggested change
| host_pool_vector.emplace_back(new PoPSModel::StandardSingleHostPool( | |
| mt, | |
| susceptible, | |
| exposed, | |
| config.latency_period_steps, | |
| infected, | |
| total_exposed, | |
| resistant, | |
| mortality_tracker, | |
| mortality, | |
| total_hosts, | |
| model.environment(), | |
| config.generate_stochasticity, | |
| config.reproductive_rate, | |
| config.establishment_stochasticity, | |
| config.establishment_probability, | |
| config.rows, | |
| config.cols, | |
| spatial_indices)); | |
| host_pool_vector.emplace_back( | |
| mt, | |
| susceptible, | |
| exposed, | |
| config.latency_period_steps, | |
| infected, | |
| total_exposed, | |
| resistant, | |
| mortality_tracker, | |
| mortality, | |
| total_hosts, | |
| model.environment(), | |
| config.generate_stochasticity, | |
| config.reproductive_rate, | |
| config.establishment_stochasticity, | |
| config.establishment_probability, | |
| config.rows, | |
| config.cols, | |
| spatial_indices); |
…ulations in all cells
…ses (i.e., vector size is stable)
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