fixed nexus export error in mugration analysis

neherlab · Sep 5, 2019 · afd24b0 · afd24b0
1 parent 739b4e1
commit afd24b0
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/treetime/wrappers.py b/treetime/wrappers.py
@@ -777,9 +777,9 @@ def mugration(params):
 
     terminal_count = 0
     for n in mug.tree.find_clades():
+        n.confidence=None
         if n.up is None:
             continue
-        n.confidence=None
         # due to a bug in older versions of biopython that truncated filenames in nexus export
         # we truncate them by hand and make them unique.
         if n.is_terminal() and len(n.name)>40 and bioversion<"1.69":