v0.4.2

🏠 Internal

• [ENH] Add docker image build for arm64 architecture #429 (@rmanaem @surchs)

Authors: 2

• Arman Jahanpour (@rmanaem)
• Sebastian Urchs (@surchs)

v0.4.1

🐛 Bug Fixes

• [FIX] Disallow empty string/whitespace-only pheno --name values #426 (@alyssadai)

🏠 Internal

• [MNT] Configure mypy in pre-commit for type checking #423 (@alyssadai)

Authors: 1

• Alyssa Dai (@alyssadai)

v0.4.0

💥 Breaking Changes

• [MNT] Deprecate Cognitive Atlas vocab namespace & add check for unsupported namespaces #410 (@alyssadai)

Authors: 1

• Alyssa Dai (@alyssadai)

v0.3.5

🚀 Enhancements

• [ENH] Allow unrecognized pipeline names and versions in processing status file #401 (@alyssadai)
• [MNT] Remind about missing value annotation in age parsing error #402 (@alyssadai)

Authors: 1

• Alyssa Dai (@alyssadai)

v0.3.4

🚀 Enhancements

• [ENH] Load pipeline catalog dynamically and error out when it is empty/not found #391 (@surchs @alyssadai)

🏠 Internal

• [REF] Refactor utilities #385 (@alyssadai)

🔩 Dependency Updates

• [REF] Upgrade codebase to Pydantic>2 #389 (@alyssadai)

Authors: 2

• Alyssa Dai (@alyssadai)
• Sebastian Urchs (@surchs)

v0.3.3

🚀 Enhancements

• [FIX] Package pipeline-catalog as data files in CLI installation #379 (@alyssadai)

Authors: 1

• Alyssa Dai (@alyssadai)

v0.3.2

🚀 Enhancements

• [FIX] Make pipeline-catalog submodule available to built Docker image #373 (@alyssadai)

Authors: 1

• Alyssa Dai (@alyssadai)

v0.3.1

🚀 Enhancements

• [FIX] Add missing _id suffix to processing status file column mappings #370 (@alyssadai)

📝 Documentation

• [DOC] Move pre-commit setup to README.md #368 (@alyssadai)

Authors: 1

• Alyssa Dai (@alyssadai)

v0.3.0

💥 Breaking Changes

• [MODEL] Model basic pipeline availability info in imaging session #347 (@alyssadai)

🚀 Enhancements

• [ENH] Add derivatives command and pipeline-catalog submodule #349 (@alyssadai)
• [REF] Rename Neurobagel-created session to ses-unnamed #358 (@alyssadai)
• [ENH] More user-friendly handling of input decoding/reading errors #337 (@alyssadai)

🏠 Internal

• [INF] Add script to generate nb_vocab.ttl #360 (@alyssadai)
• [MNT] Removed build docker nightly workflow file #348 (@rmanaem)

📝 Documentation

• [DOC] Remove usage instructions & update development environment section in README #365 (@alyssadai)

Authors: 2

• Alyssa Dai (@alyssadai)
• Arman Jahanpour (@rmanaem)

v0.2.2

Release Notes

[CI] Release the CLI (#330)

This release introduces short option names for CLI commands and fixes a bug that prevented hyphens in column names from being parsed.

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🚀 Enhancements

• [ENH] Update help text and add short CLI options #316 (@alyssadai)

🐛 Bug Fixes

• [FIX] Handle dashes (/any chars that are not python variable valid) in column names #313 (@alyssadai)

📝 Documentation

• [DOC] Note case sensitivity of subject IDs in bids IDs check error #317 (@alyssadai)

Authors: 1

• Alyssa Dai (@alyssadai)