Updated `fetch-repo` script to check annotation status #28

	name: Fetch Repositories

	on:
	push:
	branches:
	- feat-80
	schedule:
	# Run every week
	- cron: '0 0 * * 0' # Runs every Sunday at midnight UTC
	workflow_dispatch: # Allows manual triggering of the workflow

	permissions:
	contents: write

	jobs:
	fetch-repos:
	runs-on: ubuntu-latest

	steps:
	- name: Checkout repository
	uses: actions/checkout@v4

	- name: Generate a token
	id: generate-token
	uses: actions/create-github-app-token@v1
	with:
	app-id: ${{ vars.NB_BOT_ID }}
	private-key: ${{ secrets.NB_BOT_KEY }}

	- name: Run fetch-repos.sh
	env:
	GH_TOKEN: ${{ steps.generate-token.outputs.token }}
	working-directory: scripts
	run: \|
	chmod +x fetch-repos.sh
	./fetch-repos.sh

	- name: Commit changes
	run: \|
	git config --global user.name "Neurobagel Bot"
	git config --global user.email "neurobagel-bot[bot]@users.noreply.github.com"
	git add ./src/assets/repos.json
	git commit -m "Updated repos.json with latest repository names"
	git push origin feat-80
	env:
	GITHUB_TOKEN: ${{ steps.generate-token.outputs.token }}

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