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Develop #116

Merged
merged 295 commits into from
Jul 11, 2022
Merged

Develop #116

merged 295 commits into from
Jul 11, 2022

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auraoupa
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Taking the latest developments into the docs branch

timspainNERSC and others added 30 commits February 23, 2022 12:26
@timspainNERSC
C++17 and squashing clang warnings.
6185537
@timspainNERSC
Change C++ standard to C++17 (also project name)
3c123bd
@timspainNERSC
Revert "C++17 and squashing clang warnings."
35bcdfd 
This reverts commit 6185537.
@timspainNERSC
Change the target C++ version in the README
5e1e09c
@timspainNERSC
Merge pull request #86 from nextsimdg/issue85_cxx17
0722d95 
Change C++ standard to C++17 (also project name)
@timspainNERSC
Merge remote-tracking branch 'origin/develop' into nu_modules
b226cf1
@timspainNERSC
Eliminate clang compile warnings in Module.
9029e3b
@timspainNERSC
Tests fail with the inline variables. Manual revert.
90372d0
@timspainNERSC
Add explicit instantiations to the module class headers.
4207fe4
@timspainNERSC
Add the ModelData class and test.
4b4ad27
@timspainNERSC
Add copy ctor and copy assignment to ModelData.
fe5776a
@timspainNERSC
Rename ModelData to ModelArray.
a301e72
@timspainNERSC
ModelModule and ModelState classes.
4223b9b
@timspainNERSC
Rename the class under test for the ModelArray tests.
55ec7f1
@timspainNERSC
ModelModule expansion and test.
38c889d
@timspainNERSC
Merge branch 'issue67_logging' into feat_model_module
542c05e
@timspainNERSC
Test ModelModule registration.
ffd6da5
@timspainNERSC
PrognosticData is now PrognosticElementData.
b5d91a1
@timspainNERSC
Add the new PrognosticData class, and MM field typedefs.
4a69c9c
@timspainNERSC
PrognosticData unique data retrieval methods.
d611de7
@timspainNERSC
Add const accessors to ModelArray, use them in ProgData.
f88321f
@draenog
Combine build and test jobs in CI
efab78a 
It allows to remove some duplicated code.
@auraoupa
Merge pull request #89 from nextsimdg/issue88_simplify_CI
f1f7cb3 
Combine build and test jobs in CI
@timspainNERSC
Add a method of sharing data between ModelModules.
e5a93f1
@timspainNERSC
Share arrays from PrognosticData.
3618f40
@timspainNERSC
Create a list of read-only ModelArrays.
af5b0fc
@timspainNERSC
Merge pull request #68 from nextsimdg/issue67_logging
5119f99 
Add logging class and library
@timspainNERSC
Add to PrognosticData.
feca48c
@timspainNERSC
Make ModelState use a pointer for polymorphism.
db41952
@timspainNERSC
Introduce the concept of different field types to ModuleArray.
9076d7d
timspainNERSC and others added 26 commits June 14, 2022 17:53
@timspainNERSC
Add landmask and missing data.
dad2f6e
@timspainNERSC
Make MissingData configurable and not more consty.
2c9c703
@timspainNERSC
Use the Configured keyMap to parameterize the option name.
629b566
@timspainNERSC
clang format
4c48bf4
@timspainNERSC
Avoid the Static Initialization Order Fiasco with the ocean mask.
dbd5b87
@timspainNERSC
Avoid memory leak if the ocean mask is repeatedly set.
b4d394e
@timspainNERSC
Merge pull request #106 from nextsimdg/issue102_time_parses
eaa5fdf 
Implement real time classes for time points and durations.
@timspainNERSC
Merge branch 'issue100_output' of git@github.com:nextsimdg/nextsimdg.…
fd1b7c1 
…git into issue100_output
@timspainNERSC
Merge branch 'issue100_output' of git@github.com:nextsimdg/nextsimdg.git
26d9fc5 
into issue100_output
@timspainNERSC
Merge pull request #108 from nextsimdg/issue107_landmask
d888473 
Issue 107: Add landmask and missing data to fields and output
@timspainNERSC
Add masks to the grid tests.
529cd74
@timspainNERSC
Set no land mask in the test. Make sure the land mask is allocated.
6d68db8
@timspainNERSC
Fix the mask in the IceGrowth test.
0874440
@timspainNERSC
More Iterator tests.
45482f2
@timspainNERSC
Fix the time classes for broken libstdc++ time handling.
b52862c
@timspainNERSC
Maybe tests work now?
628fe51
@timspainNERSC
Call the function to actually read RectGrid files.
c06fcd5
@timspainNERSC
Set the implementation of IStructure.
db172fe
@timspainNERSC
A rectangular grid with a land-sea mask, and consequent changes.
dda1ccf
@timspainNERSC
clang formatting
206a8a0
@timspainNERSC
Add the 30x30 masked restart file.
92d24ae
@timspainNERSC
Add a ModelMetadata class, especially for output.
d02958a
@timspainNERSC
Spelling and format.
5f60018
@timspainNERSC
Break out common metadata and add a time stamp to restart files.
518eefa
@timspainNERSC
clang formatting
9d4e99e
@timspainNERSC
Merge pull request #101 from nextsimdg/issue100_output
91da296 
Issue 100 output
@auraoupa auraoupa requested a review from stephanieleroux July 11, 2022 13:14
@auraoupa auraoupa closed this Jul 11, 2022
@auraoupa auraoupa reopened this Jul 11, 2022
@auraoupa auraoupa merged commit 8fb425a into docs Jul 11, 2022
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@stephanieleroux stephanieleroux Awaiting requested review from stephanieleroux

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@auraoupa @timspainNERSC @draenog