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Get rid of lib to merge tools v2.14.1 #588

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Get rid of lib to merge tools v2.14.1

Get rid of lib to merge tools v2.14.1 #588

Triggered via pull request June 26, 2024 13:36
@JoseEspinosaJoseEspinosa
synchronize #391
JoseEspinosa:updates
Status Failure
Total duration 5m 6s
Artifacts –

ci.yml

on: pull_request
Matrix: Test available aligners
Matrix: Test workflow parameters
Matrix: Run pipeline with test data
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11 errors and 5 warnings
Test workflow parameters (--skip_trimming)
Process completed with exit code 1.
Test workflow parameters (--skip_consensus_peaks)
The job was canceled because "_--skip_trimming" failed.
Test workflow parameters (--skip_consensus_peaks)
The operation was canceled.
Test available aligners (chromap)
Process completed with exit code 1.
Run pipeline with test data (23.04.0)
Process completed with exit code 1.
Run pipeline with test data (latest-everything)
The job was canceled because "_23_04_0" failed.
Run pipeline with test data (latest-everything)
The operation was canceled.
Test available aligners (star)
The job was canceled because "chromap" failed.
Test available aligners (star)
The operation was canceled.
Test available aligners (bowtie2)
The job was canceled because "chromap" failed.
Test available aligners (bowtie2)
The operation was canceled.
Test workflow parameters (--skip_trimming)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Test workflow parameters (--skip_trimming)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Test available aligners (chromap)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Test available aligners (chromap)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run pipeline with test data (23.04.0)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.