Swap to apptainer

nf-core · Jun 29, 2023 · f817111 · f817111
1 parent f1d88a7
commit f817111
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/conf/crukmi.config b/conf/crukmi.config
@@ -12,7 +12,7 @@ singularity {
 }
 
 process {
-  beforeScript = 'module load apps/singularity/3.8.0'
+  beforeScript = 'module load apps/apptainer/1.0.0'
   executor = 'slurm'
 
   errorStrategy = {task.exitStatus in [143,137,104,134,139,140] ? 'retry' : 'finish'}