Hsmurali dev

.dockerignore

@@ -0,0 +1,6 @@
+.git
+.github
+.nextflow*
+.nextflow.log*
+work/
+results/

.gitignore

@@ -15,3 +15,5 @@ R_sessionInfo.log
 
 .vscode/
 profile.svg
+
+.latch/.logs

.latch/.logs/35729_nf_nf_core_cutandrun:0.1.0-96a42f-wip-04e31f/docker-build-logs.txt

@@ -0,0 +1,84 @@
+Step 1/12 : from 812206152185.dkr.ecr.us-west-2.amazonaws.com/latch-base-nextflow:v2.0.0
+
+
+ ---> 98d9cd0f2a3a
+
+Step 2/12 : workdir /tmp/docker-build/work/
+
+
+ ---> Using cache
+
+ ---> 8f95defb9629
+
+Step 3/12 : shell [     "/usr/bin/env", "bash",     "-o", "errexit",     "-o", "pipefail",     "-o", "nounset",     "-o", "verbose",     "-o", "errtrace",     "-O", "inherit_errexit",     "-O", "shift_verbose",     "-c" ]
+
+
+ ---> Using cache
+
+ ---> b2b2f8c4e3df
+
+Step 4/12 : env TZ='Etc/UTC'
+
+
+ ---> Using cache
+
+ ---> ee07cb31686a
+
+Step 5/12 : env LANG='en_US.UTF-8'
+
+
+ ---> Using cache
+
+ ---> b133cffabb9a
+
+Step 6/12 : arg DEBIAN_FRONTEND=noninteractive
+
+
+ ---> Using cache
+
+ ---> 7f1ec8bb956e
+
+Step 7/12 : run pip install latch==2.52.1
+
+
+ ---> Using cache
+
+ ---> f6fd6659b394
+
+Step 8/12 : run mkdir /opt/latch
+
+
+ ---> Using cache
+
+ ---> 48d9448c23ba
+
+Step 9/12 : copy . /root/
+
+
+ ---> 3130bdb47e3b
+
+Step 10/12 : arg tag
+
+
+ ---> Running in 1a3875c24100
+
+ ---> 81ecc678fa8c
+
+Step 11/12 : env FLYTE_INTERNAL_IMAGE $tag
+
+
+ ---> Running in a1e153766787
+
+ ---> 1db50306d0e6
+
+Step 12/12 : workdir /root
+
+
+ ---> Running in b5b897a3da23
+
+ ---> 230f37d31b1c
+
+Successfully built 230f37d31b1c
+
+Successfully tagged 812206152185.dkr.ecr.us-west-2.amazonaws.com/35729_nf_nf_core_cutandrun:0.1.0-96a42f-wip-04e31f
+

.latch/.logs/35729_nf_nf_core_cutandrun:0.1.0-96a42f-wip-0bd102/docker-build-logs.txt

@@ -0,0 +1,84 @@
+Step 1/12 : from 812206152185.dkr.ecr.us-west-2.amazonaws.com/latch-base-nextflow:v2.0.0
+
+
+ ---> 98d9cd0f2a3a
+
+Step 2/12 : workdir /tmp/docker-build/work/
+
+
+ ---> Using cache
+
+ ---> 8f95defb9629
+
+Step 3/12 : shell [     "/usr/bin/env", "bash",     "-o", "errexit",     "-o", "pipefail",     "-o", "nounset",     "-o", "verbose",     "-o", "errtrace",     "-O", "inherit_errexit",     "-O", "shift_verbose",     "-c" ]
+
+
+ ---> Using cache
+
+ ---> b2b2f8c4e3df
+
+Step 4/12 : env TZ='Etc/UTC'
+
+
+ ---> Using cache
+
+ ---> ee07cb31686a
+
+Step 5/12 : env LANG='en_US.UTF-8'
+
+
+ ---> Using cache
+
+ ---> b133cffabb9a
+
+Step 6/12 : arg DEBIAN_FRONTEND=noninteractive
+
+
+ ---> Using cache
+
+ ---> 7f1ec8bb956e
+
+Step 7/12 : run pip install latch==2.52.1
+
+
+ ---> Using cache
+
+ ---> f6fd6659b394
+
+Step 8/12 : run mkdir /opt/latch
+
+
+ ---> Using cache
+
+ ---> 48d9448c23ba
+
+Step 9/12 : copy . /root/
+
+
+ ---> dad6ab07ea8c
+
+Step 10/12 : arg tag
+
+
+ ---> Running in 7d31976c569c
+
+ ---> b1c55a307188
+
+Step 11/12 : env FLYTE_INTERNAL_IMAGE $tag
+
+
+ ---> Running in 5fa81e1e8c1f
+
+ ---> d39c058d6be3
+
+Step 12/12 : workdir /root
+
+
+ ---> Running in 04fa31636ed1
+
+ ---> d2fd0276f2d2
+
+Successfully built d2fd0276f2d2
+
+Successfully tagged 812206152185.dkr.ecr.us-west-2.amazonaws.com/35729_nf_nf_core_cutandrun:0.1.0-96a42f-wip-0bd102
+

.latch/.logs/35729_nf_nf_core_cutandrun:0.1.0-96a42f-wip-14b20d/docker-build-logs.txt

@@ -0,0 +1,84 @@
+Step 1/12 : from 812206152185.dkr.ecr.us-west-2.amazonaws.com/latch-base-nextflow:v2.0.0
+
+
+ ---> 98d9cd0f2a3a
+
+Step 2/12 : workdir /tmp/docker-build/work/
+
+
+ ---> Using cache
+
+ ---> 8f95defb9629
+
+Step 3/12 : shell [     "/usr/bin/env", "bash",     "-o", "errexit",     "-o", "pipefail",     "-o", "nounset",     "-o", "verbose",     "-o", "errtrace",     "-O", "inherit_errexit",     "-O", "shift_verbose",     "-c" ]
+
+
+ ---> Using cache
+
+ ---> b2b2f8c4e3df
+
+Step 4/12 : env TZ='Etc/UTC'
+
+
+ ---> Using cache
+
+ ---> ee07cb31686a
+
+Step 5/12 : env LANG='en_US.UTF-8'
+
+
+ ---> Using cache
+
+ ---> b133cffabb9a
+
+Step 6/12 : arg DEBIAN_FRONTEND=noninteractive
+
+
+ ---> Using cache
+
+ ---> 7f1ec8bb956e
+
+Step 7/12 : run pip install latch==2.52.1
+
+
+ ---> Using cache
+
+ ---> f6fd6659b394
+
+Step 8/12 : run mkdir /opt/latch
+
+
+ ---> Using cache
+
+ ---> 48d9448c23ba
+
+Step 9/12 : copy . /root/
+
+
+ ---> 2b71d40a148e
+
+Step 10/12 : arg tag
+
+
+ ---> Running in b16d629ad398
+
+ ---> ea84f03714a6
+
+Step 11/12 : env FLYTE_INTERNAL_IMAGE $tag
+
+
+ ---> Running in 29ebfa3ab767
+
+ ---> 29264892e6b9
+
+Step 12/12 : workdir /root
+
+
+ ---> Running in 90cfd5010b9d
+
+ ---> 3a019d9bf388
+
+Successfully built 3a019d9bf388
+
+Successfully tagged 812206152185.dkr.ecr.us-west-2.amazonaws.com/35729_nf_nf_core_cutandrun:0.1.0-96a42f-wip-14b20d
+

.latch/.logs/35729_nf_nf_core_cutandrun:0.1.0-96a42f-wip-15bc6c/docker-build-logs.txt

@@ -0,0 +1,84 @@
+Step 1/12 : from 812206152185.dkr.ecr.us-west-2.amazonaws.com/latch-base-nextflow:v2.0.0
+
+
+ ---> 98d9cd0f2a3a
+
+Step 2/12 : workdir /tmp/docker-build/work/
+
+
+ ---> Using cache
+
+ ---> 8f95defb9629
+
+Step 3/12 : shell [     "/usr/bin/env", "bash",     "-o", "errexit",     "-o", "pipefail",     "-o", "nounset",     "-o", "verbose",     "-o", "errtrace",     "-O", "inherit_errexit",     "-O", "shift_verbose",     "-c" ]
+
+
+ ---> Using cache
+
+ ---> b2b2f8c4e3df
+
+Step 4/12 : env TZ='Etc/UTC'
+
+
+ ---> Using cache
+
+ ---> ee07cb31686a
+
+Step 5/12 : env LANG='en_US.UTF-8'
+
+
+ ---> Using cache
+
+ ---> b133cffabb9a
+
+Step 6/12 : arg DEBIAN_FRONTEND=noninteractive
+
+
+ ---> Using cache
+
+ ---> 7f1ec8bb956e
+
+Step 7/12 : run pip install latch==2.52.1
+
+
+ ---> Using cache
+
+ ---> f6fd6659b394
+
+Step 8/12 : run mkdir /opt/latch
+
+
+ ---> Using cache
+
+ ---> 48d9448c23ba
+
+Step 9/12 : copy . /root/
+
+
+ ---> 9e03c04bae9d
+
+Step 10/12 : arg tag
+
+
+ ---> Running in cdd6af3b7e8e
+
+ ---> 6d7e0cacd835
+
+Step 11/12 : env FLYTE_INTERNAL_IMAGE $tag
+
+
+ ---> Running in f1a23b89a2a7
+
+ ---> 3fce6f74d6eb
+
+Step 12/12 : workdir /root
+
+
+ ---> Running in 712abffd8a6e
+
+ ---> 6003ee35c04d
+
+Successfully built 6003ee35c04d
+
+Successfully tagged 812206152185.dkr.ecr.us-west-2.amazonaws.com/35729_nf_nf_core_cutandrun:0.1.0-96a42f-wip-15bc6c
+