Revert sratools fasterqdump version to fix #221

nf-core · Jan 30, 2024 · b7979a3 · b7979a3
1 parent 80df440
commit b7979a3
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Showing 4 changed files with 68 additions and 4 deletions.
diff --git a/modules.json b/modules.json
@@ -13,7 +13,8 @@
                     "sratools/fasterqdump": {
                         "branch": "master",
                         "git_sha": "e719354ba77df0a1bd310836aa2039b45c29d620",
-                        "installed_by": ["fastq_download_prefetch_fasterqdump_sratools"]
+                        "installed_by": ["fastq_download_prefetch_fasterqdump_sratools"],
+                        "patch": "modules/nf-core/sratools/fasterqdump/sratools-fasterqdump.diff"
                     },
                     "sratools/prefetch": {
                         "branch": "master",

diff --git a/modules/nf-core/sratools/fasterqdump/environment.yml b/modules/nf-core/sratools/fasterqdump/environment.yml
diff --git a/modules/nf-core/sratools/fasterqdump/main.nf b/modules/nf-core/sratools/fasterqdump/main.nf
diff --git a/modules/nf-core/sratools/fasterqdump/sratools-fasterqdump.diff b/modules/nf-core/sratools/fasterqdump/sratools-fasterqdump.diff