nf-core linting

Important! Template update for nf-core/tools v3.0.2 #1230

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GitHub Actions / JUnit Test Report failed Oct 14, 2024 in 0s

1 tests run, 0 passed, 0 skipped, 1 failed.

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Check failure on line 1 in Test Process CUSTOM_SRATOOLSNCBISETTINGS

github-actions / JUnit Test Report

Test Process CUSTOM_SRATOOLSNCBISETTINGS.Should run without failures

Assertion failed: 

assert process.success
       |       |
       |       false
       CUSTOM_SRATOOLSNCBISETTINGS

Raw output


            Nextflow stdout:

N E X T F L O W  ~  version 24.09.1-edge
Launching `/home/runner/work/fetchngs/fetchngs/.nf-test-e184567e4bb5df640df6a4032ca393df.nf` [small_agnesi] DSL2 - revision: c7982b80dd
Downloading plugin nf-schema@2.1.1
WARN: Access to undefined parameter `modules_testdata_base_path` -- Initialise it to a default value eg. `params.modules_testdata_base_path = some_value`
ERROR ~ No such file or directory: /home/runner/work/fetchngs/fetchngs/.nf-test/tests/e184567e4bb5df640df6a4032ca393df/nullgeneric/config/ncbi_user_settings.mkfg

 -- Check script '/home/runner/work/fetchngs/fetchngs/.nf-test-e184567e4bb5df640df6a4032ca393df.nf' at line: 34 or see '/home/runner/work/fetchngs/fetchngs/.nf-test/tests/e184567e4bb5df640df6a4032ca393df/meta/nextflow.log' file for more details
Nextflow stderr:

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